allpy
annotate test/test.py @ 97:7dd461d17f96
lib::project::save_fasta
| author | boris <bnagaev@gmail.com> |
|---|---|
| date | Wed, 20 Oct 2010 22:49:02 +0400 |
| parents | ea3113da42ca |
| children | 3d40d7b9a123 |
| rev | line source |
|---|---|
| bnagaev@83 | 1 from allpy.lib.project import Project |
| bnagaev@83 | 2 |
| bnagaev@83 | 3 p = Project(open('1jcc_in.fasta')) |
| bnagaev@83 | 4 print "alignment length: %i" % len(p) |
| bnagaev@83 | 5 print "sequence `: %s" % str(p.sequences[0]) |
| bnagaev@95 | 6 |
| bnagaev@83 | 7 p.sequences[0].pdb_chain_add(open('1jcc.pdb'), '1jcc', 'A') |
| bnagaev@83 | 8 |