allpy
annotate NEWS @ 735:632a0708ab33
blocks3d/www: allow blocks not to be continuous
Changes:
* javascript
* blocks_to_html method of AlignmentMixin
* test for blocks viewer (add one non-continuous block)
Currently block can have either "start" and "end" or "positions" attribute,
but not both. "start" and "end" attributes are not deprecated and can be
used if blocks are known to be continuous or while writting blocks
javascript by hands.
close #71
| author | boris <bnagaev@gmail.com> |
|---|---|
| date | Fri, 08 Jul 2011 20:21:39 +0200 |
| parents | dcb78a91e981 |
| children | da46b25fd67d |
| rev | line source |
|---|---|
| dendik@624 | 1 1.3.1 |
| dendik@624 | 2 |
| dendik@697 | 3 * new: Alignments, Sequences and Blocks now can have Markups, see the wiki |
| dendik@717 | 4 * new: File format 'markup' for storing alignment with arbitrary markups |
| dendik@633 | 5 * new: processor allpy.processors.Needle() |
| dendik@633 | 6 * new: method allpy.base.Alignment.rows_as_strings() |
| dendik@650 | 7 * new: method allpy.base.Alignment.row_as_list(sequence) |
| dendik@650 | 8 * new: method allpy.base.Alignment.row_as_string(sequence) |
| dendik@657 | 9 * new: columns_as_lists() returns list of lists, each has 'column' attribute |
| dendik@662 | 10 * new: javascript viewer colors columns by conservedness |
| dendik@624 | 11 |
| dendik@602 | 12 1.3.0 (2011-04-15) |
| dendik@602 | 13 |
| dendik@602 | 14 * new: started NEWS file |
| dendik@602 | 15 * new: started tracking version numbers |