allpy
annotate allpy/dna.py @ 280:2f11b877af08
Proper dna.Monomer, dna.MonomerType, dna.Sequence
| author | Daniil Alexeyevsky <me.dendik@gmail.com> |
|---|---|
| date | Wed, 15 Dec 2010 20:39:18 +0300 |
| parents | 353379082202 |
| children | e3bcb9f8d7b0 |
| rev | line source |
|---|---|
| bnagaev@240 | 1 import base |
| me@280 | 2 |
| me@280 | 3 class MonomerType(base.MonomerType): |
| me@280 | 4 by_code1 = {} |
| me@280 | 5 by_code3 = {} |
| me@280 | 6 by_name = {} |
| me@280 | 7 |
| me@280 | 8 class Monomer(base.Monomer): |
| me@280 | 9 """DNA monomers: nucleotides.""" |
| me@280 | 10 monomer_type = MonomerType |
| me@280 | 11 |
| me@280 | 12 MonomerType._initialize('d') |
| me@280 | 13 MonomerType.instance_type = Monomer |
| bnagaev@240 | 14 |
| bnagaev@240 | 15 class Sequence(base.Sequence): |
| bnagaev@240 | 16 pass |
| bnagaev@240 | 17 |
| me@280 | 18 # vim: set ts=4 sts=4 sw=4 et: |