########################################
# Program: needle
# Rundate: Mon Oct 02 2006 09:08:25
# Commandline: needle
# [-asequence] 1.fasta
# [-bsequence] 2.fasta
# [-outfile] 3.fasta
# -auto
# Align_format: srspair
# Report_file: 3.fasta
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: D42105
# 2: D85081
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 606
# Identity: 433/606 (71.5%)
# Similarity: 433/606 (71.5%)
# Gaps: 173/606 (28.5%)
# Score: 2165.0
#
#
#=======================================
D42105 1 atgagcaaggtattagttcttaaatccagcatcctggcagggtactctca 50
||||||||||||||||||||||||||||||||||||||||||||||||||
D85081 1 atgagcaaggtattagttcttaaatccagcatcctggcagggtactctca 50
D42105 51 gtctaatcagttgtcgattattttgttgaacaatggcgcgaaaagcactc 100
||||||||||||||||||||||||||||||||||||||||||||||||||
D85081 51 gtctaatcagttgtcgattattttgttgaacaatggcgcgaaaagcactc 100
D42105 101 cgcgtgatgaaatcaccgttcgcgacctggctgcaaatccgattccggta 150
||||||||||||||||||||||||||||||||||||||||||||||||||
D85081 101 cgcgtgatgaaatcaccgttcgcgacctggctgcaaatccgattccggta 150
D42105 151 ctggatggcgaactggttggcgctctgcgtccgagcgatgcgccgctgac 200
||||||||||||||||||||||||||||||||||||||||||||||||||
D85081 151 ctggatggcgaactggttggcgctctgcgtccgagcgatgcgccgctgac 200
D42105 201 tccgcgtcagcaggaagctctggcactttccgatgagttgattgccgagc 250
||||||||||||||||||||||||||||||||||||||||||||||||||
D85081 201 tccgcgtcagcaggaagctctggcactttccgatgagttgattgccgagc 250
D42105 251 tgaaagcccacgacgttatcgttattgcggcaccgatgtataacttcaac 300
||||||||||||||||||||||||||||||||||||||||||||||||||
D85081 251 tgaaagcccacgacgttatcgttattgcggcaccgatgtataacttcaac 300
D42105 301 atctcgactcagttgaaaaactattttgacctggttgcccgcgcaggcgt 350
||||||||||||||||||||||||||||||||||||||||||||||||||
D85081 301 atctcgactcagttgaaaaactattttgacctggttgcccgcgcaggcgt 350
D42105 351 tactttccgctataccgagaacggtccggaaggtctggtaacgggtaaaa 400
||||||||||||||||||||||||||||||||||||||||||||||||||
D85081 351 tactttccgctataccgagaacggtccggaaggtctggtaacgggtaaaa 400
D42105 401 aagccatcgttattaccagccgcggcgggatcc----------------- 433
|||||||||||||||||||||||||||||||||
D85081 401 aagccatcgttattaccagccgcggcgggatccacaaagatggaccaacg 450
D42105 433 -------------------------------------------------- 433
D85081 451 gacctggtgacgccgtatctgtccacgttcctcggctttatcggcattac 500
D42105 433 -------------------------------------------------- 433
D85081 501 cgatgtgaaatttgtcttcgccgaagggatcgcatacggtccggaaatgg 550
D42105 433 -------------------------------------------------- 433
D85081 551 cagcgaaagcacagtctgacgcaaaagcagccatcgacagcattgtttct 600
D42105 433 ------ 433
D85081 601 gcataa 606
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