Документ взят из кэша поисковой машины. Адрес оригинального документа : http://kodomo.cmm.msu.ru/~miss_lazy/term1/text/helix-sheet-loop.spt Дата изменения: Wed Feb 10 20:33:31 2010 Дата индексирования: Thu Apr 8 14:36:03 2010 Кодировка:

zap
pause
load H:\Term1\Block3\Practices\Practice 12\1OYG.pdb
pause
background white
pause
structure
pause
define hx 288-300:A

pause
restrict none
pause
select *:A
ribbons 150
color white
pause
select hx
color red
pause

define hx 288-300:A
pause
restrict hx
pause
select hx
ribbons 160
color red
pause

zoom 150
pause
restrict none
pause
select backbone and hx
wireframe 50
color cpk
hbond
select hx and *.CA
spacefill 50
label ---------------%r
pause

select hx and *.CB
spacefill 100
color red
select hx and (*.CA or *.CB)
spacefill 50
select hx and (*.CA or *.CB)
wireframe 20
color red
select hx and *.CA
color cpk
pause



zap
load H:\Term1\Block3\Practices\Practice 12\1OYG.pdb
restrict none
define sh (352-360:A or 345-349:A or 374-381:A)
select *:A
ribbons 150
color yellow
select sh
color green
pause


restrict none
select sh
ribbons 360
color red
pause

zoom 300
restrict none
select backbone and sh
wireframe 50
color cpk
hbond
select sh and *.CA
label ---------------%r
pause

select sh and *.CB
spacefill 100
color red
select sh and (*.CA or *.CB)
wireframe 20
color red
select sh and *.CA
color cpk
pause

zap
load H:\Term1\Block3\Practices\Practice 12\1OYG.pdb
restrict none
define loop 202-205:A
pause
select loop and backbone
wireframe 50
color green
pause
select ser202:A.CA
label ser202:A.CA
pause
select ser202:A.CA
label ser202:A.CA
pause
select asp203:A.CA
label asp203:A.CA
pause
select ser204:A.CA
label ser204:A.CA
pause
select ser205:A.CA
label ser205:A.CA
pause
select loop
hbonds
hbond 10
zoom 300