Документ взят из кэша поисковой машины. Адрес оригинального документа : http://kodomo.cmm.msu.ru/~lu.andreeva/water1.water Дата изменения: Thu Mar 19 20:07:38 2009 Дата индексирования: Tue Oct 2 03:28:28 2012 Кодировка:

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# Program: water
# Rundate: Thu 19 Mar 2009 21:28:48
# Commandline: water
# [-asequence] bioh_ecoli.fasta
# [-bsequence] bioh_neimb.fasta
# [-outfile] gp1.water
# -auto
# Align_format: srspair
# Report_file: gp1.water
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#=======================================
#
# Aligned_sequences: 2
# 1: BIOH_ECOLI
# 2: BIOH_NEIMB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 238
# Identity: 69/238 (29.0%)
# Similarity: 113/238 (47.5%)
# Gaps: 15/238 ( 6.3%)
# Score: 280.0
#
#
#=======================================

BIOH_ECOLI 18 LLHGWGLNAEVWRCIDEELSSHFTLHLVDLPGFGRSRGFGALSLADMAEA 67
|:||||.|..::..:...|.:.:.:..|||||.|.:.......:|..|:.
BIOH_NEIMB 19 LIHGWGANRHMFDDLMPRLPATWPVSAVDLPGHGDAPFVRPFDIAAAADG 68

BIOH_ECOLI 68 VLQQAPDKAIWLGWSLGGLVASQIALTHPERVQALVTVASSPCFSARDEW 117
:..|....|..||||||||||..:|..||::|::|...||....:|.:::
BIOH_NEIMB 69 IAAQIDAPADILGWSLGGLVALYLAARHPDKVRSLCLTASFARLTADEDY 118

BIOH_ECOLI 118 P-GIKPDVLAGFQQQLSDDFQRTVERFLALQTMGTETARQDARALKKTVL 166
| |:....|.........|:.:.:::||.||.:.|..| ..::
BIOH_NEIMB 119 PEGLAAPALGKMVGAFRSDYAKHIKQFLQLQLLHTPDA--------DGII 160

BIOH_ECOLI 167 ALPMPEV------DVLNGGLEILKTVDLRQPLQNVSMPFLRLYGYLDGLV 210
...:|:: ..|...|:..:..|.|..|..:.:|.|.::|..|.:.
BIOH_NEIMB 161 GRILPDLARCGTPQALQEALDAAERADARHLLDKIDVPVLLVFGGKDAIT 210

BIOH_ECOLI 211 PRKVVPMLDKLWPHSESYIFAKAAHAPFISHPAEFCHL 248
|.::...|.:....|...:..|||||||:||...|..|
BIOH_NEIMB 211 PPRMGEYLHRRLKGSRLVVMEKAAHAPFLSHAEAFAAL 248


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