Документ взят из кэша поисковой машины. Адрес оригинального документа : http://kodomo.cmm.msu.ru/~anuta_al/projects/myproteins.msf Дата изменения: Sun Apr 26 17:15:36 2009 Дата индексирования: Tue Oct 2 13:59:49 2012 Кодировка:

GDC ******** GeneDoc Multiple Sequence Alignment Editor ********
GDC 010a770190000cffffffffffff000000000000000000808080c0c0c0ffff
GDC ff000000000000f43f000000000000f43f000000000000f03f0000000000
GDC 00f03f00A000300000190000cA54696d6573204e657720526f6d616e00A0
GDC 0320002000000000000000000000601444e000245510003535400044b520
GDC 00546595700064c49564d0028435348415f42414353552c0d0a524543515
GDC f53594e59332c0d0a524543515f42414353552c0d0a524543515f45434f4
GDC c492c0d0a524543515f5041534d552c0d0a524543515f484145494e293b0
GDC d0a00BBAABAAA0000002a000a00020001B20AAA000a203a2000203a20000
GDC 0000000000059400000000000000000000c5058000000ffff00004758000
GDC 0ff00ff000041475358000000ffffff0056434147444e535450580000ff0
GDC 0ffff00484b525800ff00000000ff4544580000ff000000ff484b5245445
GDC 800ffffff0000ff48524551444e425a5800ff000000ff005957484b52455
GDC 1444e5354425a580000000000ff00494c56415800ff00008080804659574
GDC 858000000ff808080494c564341474d4659574854505800ffffff0000000
GDC c50580000000000000047580000000000000041434753580000000000000
GDC 0564147444e5354505800000000000000484b52580000000000000045445
GDC 800000000000000484b524544580000000000000048524551444e425a580
GDC 0000000000000435957484b524551444e5354425a5800000000000000494
GDC c56415800000000000000465957485800000000000000494c564341474d4
GDC 6595748545058000000000000000300ffffff00000000ffffff808080000
GDC 00000c0c0c00000ABBBBBBBBBBBBBB00ff00A00060001000100010001000
GDC 10001A0018AA000000000000000000000003A00ff00A0000000000805640
GDC 000000000080514000000000000049400000020000000000001440A00000
GDC 00098b20c41000000001025064100000000189806410000000078b10b410
GDC 0AAABB00005374616e646172640046464c4c5353535359592a2a43432a57
GDC 4c4c4c4c5050505048485151525252524949494d545454544e4e4b4b5353
GDC 525256565656414141414444454547474747002d2d2d2d2d2d2d2d2d2d2d
GDC 2d2d2d2d2d2d2d2d2d2d2d2d2d2d2d2d2d2d2d2d2d2d2d2d4d2d2d2d2d2d
GDC 2d2d2d2d2d2d2d2d2d2d2d2d2d2d2d2d2d2d2d2d2d2d2d00BBBBB0000000
GDC 0000000060000000000000000000000000003000000000000BBAB0006503
GDC 936363134205265634e616d653a2046756c6c3d444541442d626f7820415
GDC 4502d646570656e64656e7420524e412068656c696361736520637368413
GDC b2045433d332e362e312e2d3b00503733343231205265634e616d653a204
GDC 6756c6c3d4154502d646570656e64656e7420444e412068656c696361736
GDC 520726563513b2045433d332e362e312e2d3b00503530373239205265634
GDC e616d653a2046756c6c3d4154502d646570656e64656e7420444e4120686
GDC 56c696361736520726563513b2045433d332e362e312e2d3b20416c744e6
GDC 16d653a2046756c6c3d5265636f6d62696e6174696f6e2070726f7465696
GDC e20533b00503135303433205265634e616d653a2046756c6c3d4154502d6
GDC 46570656e64656e7420444e412068656c696361736520726563513b20454
GDC 33d332e362e312e2d3b005139434c3231205265634e616d653a2046756c6
GDC c3d4154502d646570656e64656e7420444e412068656c696361736520726
GDC 563513b2045433d332e362e312e2d3b00503731333539205265634e616d6
GDC 53a2046756c6c3d4154502d646570656e64656e7420444e412068656c696
GDC 361736520726563513b2045433d332e362e312e2d3b000201b7B00000000
GDC 0000594000000000000054400000000000004e4000DAAB000000ffffff03
GDC 02014445484b524e5153540000ff00ff0000024c49564d46595741474350
GDC 00ff000000ff0004014445484b520000ff00ff0000024e5153540000ff00
GDC ff8000034c49564d46595700ff000000ff0004414700ff00000080000801
GDC 44450000ff00ff000002484b5200ffffffff0000034e510000ff00ff8000
GDC 04535400ffffffff8000054c495600ff000000ff000646595700ffffff00
GDC ff0007414700ff0000008000084d4300ffffff0080000000000000Afffff
GDC f80808000A
myproteins.msf MSF: 656 Type: P April 26, 2009 18:15 Check: 1537 ..

Name: CSHA_BACSU Len: 656 Check: 8480 Weight: 1.00
Name: RECQ_SYNY3 Len: 656 Check: 2142 Weight: 1.00
Name: RECQ_BACSU Len: 656 Check: 1516 Weight: 1.00
Name: RECQ_ECOLI Len: 656 Check: 3431 Weight: 1.00
Name: RECQ_PASMU Len: 656 Check: 5829 Weight: 1.00
Name: RECQ_HAEIN Len: 656 Check: 139 Weight: 1.00

//

1 50
CSHA_BACSU .......... ..MTITFQDF NLSSDLMKAI NRM.GFEEAT PIQAQTIPLG
RECQ_SYNY3 .......... .........M ADRQSLEEAL RRIWGYDHFR YPQGEVIDCL
RECQ_BACSU .......... .......... ..MTKLQQTL YQFFGFTSFK KGQQDIIESI
RECQ_ECOLI .......... ...MAQAEVL NLESGAKQVL QETFGYQQFR PGQEEIIDTV
RECQ_PASMU MFSSSLLSKD NKSAVDFHEI PLKQTALDVL HAVFGYQSFR KGQEEVIDAT
RECQ_HAEIN .......... MLDSPLLSKI IEKPTALSVL KSVFGYQSFR KGQEEVINAA

51 100
CSHA_BACSU LSNKDVIGQA QTGTGKTAAF GIPLVEKINP ESPNIQAIVI APTRELAIQV
RECQ_SYNY3 LARRDCLVVL PTGGGKSICF QLPAL..... .LGEGLTLVV SPLVALMEDQ
RECQ_BACSU LSGKDTIAML PTGGGKSLCY QLPGY..... .MLDGMVLIV SPLLSLMEDQ
RECQ_ECOLI LSGRDCLVVM PTGGGKSLCY QIPAL..... .LLNGLTVVV SPLISLMKDQ
RECQ_PASMU LMGKDSLVIM ATGNGKSLCY QIPAL..... .CFEGLTLVI SPLISLMKDQ
RECQ_HAEIN LNGQDALVVM ATGNGKSLCY QIPAL..... .CFDGLTLVI SPLISLMKDQ

101 150
CSHA_BACSU SEELYKIGQD KRAKVLPIYG GQDIGRQIRA LKKNP.NIIV GTPGRLLDHI
RECQ_SYNY3 VQSLRRQNLP .AACLHSQLS RPERKQVLYQ LGQQQLKLLY LSPETLLSEP
RECQ_BACSU VQQLKARGEK RAAALNSMLN RQERQFVLEH I..HRYKFLY LSPEALQSPY
RECQ_ECOLI VDQLQANGVA .AACLNSTQT REQQLEVMTG CRTGQIRLLY IAPERLMLDN
RECQ_PASMU VDQLLANGIE .ADYLNSSQT FTEQQQVQNK LMSGTLKLLY VSPEKVMTTS
RECQ_HAEIN VDQLQANGIE .ADFLNSSQT LEQQQQVQNK LISGQLKLLY VSPEKVMTNS

151 200
CSHA_BACSU NRRTIRLNNV NT..VVMDEA DEMLNMGF.. ...IDDIESI LSNVPSEHQT
RECQ_SYNY3 VWNLLRQPQV KLQGIMLDEA HCLVQWGDSF RPAYRRLGAL RRGLGRDKGQ
RECQ_BACSU VLEKLKSVPI SL..FVIDEA HCISEWGHDF RPDYSKLGQL RKKLG....H
RECQ_ECOLI FLEHLAHWNP VL..LAVDEA HCISQWGHDF RPEYAALGQL RQRFP....T
RECQ_PASMU FFHLISHCKV SF..VAIDEA HCISQWGHDF RPEYTQLGGL KSCFP....H
RECQ_HAEIN FFQLISYSKV CF..IAIDEA HCISQWGHDF RPEYTQLGGL KASFP....D

201 250
CSHA_BACSU LLFSATMPAP IKRIAERFMT EPEHVKVKAK EMTVSNIQQF YLEV......
RECQ_SYNY3 IPLAAFTATA DRQQQNLIV. ..EGLNLRSP ECFQVSPHRP QLHLKVKMVL
RECQ_BACSU PPVLALTATA TKETLQDVM. ..NLLELQHA VRHLNSVNRP NIALRVENAA
RECQ_ECOLI LPFMALTATA DDTTRQDIV. ..RLLGLNDP LIQISSFDRP NIRY...MLM
RECQ_PASMU APIMALTATA DHATRQDIL. ..RHLNLQSP HVYIGSFDRP NIRY...TLV
RECQ_HAEIN APIMALTATA DYATQQDIL. ..RHLNLKNL HKYIGSFDRP NIRY...TLE

251 300
CSHA_BACSU QERKKFDTLT RLLDIQSPEL AIVFGRTKRR VDELAEALNL RGYA.AEGIH
RECQ_SYNY3 SEYCRRQQLR RFLLKHLQES GLIYVRTRTM AINLAQWLQE RGFD.SEAYH
RECQ_BACSU DTAEKIDRVI QLVENLQG.P GIVYCPTRKW AKELAGEIKS KTSSRADFYH
RECQ_ECOLI EKFKPLDQLM RYVQEQRGKS GIIYCNSRAK VEDTAARLQS KGIS.AAAYH
RECQ_PASMU EKFKPMEQLC RFVLGQKGKS GIIYCNSRSK VERIAESLRN KGVS.AQAYH
RECQ_HAEIN EKYKPMEQLT RFVLAQKGKS GIIYCNSRNK VERIAESLRN KGVS.AAAYH

301 350
CSHA_BACSU GDLTQAKRMV ALRKFKEGAI EVLVATDVAA RGLDISGVTH VYNFDVPQDP
RECQ_SYNY3 GGLGPHQRRQ LEQKWLTGQI SSVVCTNAFG LGIDKPDTRW VLHYQAPLML
RECQ_BACSU GGLESGDRIL IQQQFIHNQL DVICCTNAFG MGVDKPDIRY VIHFHLPQTA
RECQ_ECOLI AGLENNVRAD VQEKFQRDDL QIVVATVAFG MGINKPNVRF VVHFDIPRNI
RECQ_PASMU AGLETSQREQ VQRAFQRDNV QVVVATIAFG MGINKSNVRF VVHFDLPRSI
RECQ_HAEIN AGMETAIRER VQQDFQRDNV QVVVATIAFG MGINKSNVRF VAHFDLPRSI

351 400
CSHA_BACSU ESYVHRIGRT GRAGKTGMAM TFIT.PREKS MLRAI....E QTTKRKMDRM
RECQ_SYNY3 MDYLQEVGRA GRDLQPAECL TLVSEPT..G WL........ DSGDRQLRQY
RECQ_BACSU EAFMQEIGRA GRDGKPSVSI LLRA.PGDFE LQEQIIQMES VTAEEIADVI
RECQ_ECOLI ESYYQETGRA GRDGLPAEAM LFYD.PADMA WLRRCLEEKP QGQLQDIERH
RECQ_PASMU ESYYQETGRA GRDDLPAEAV LFYE.PADYA WLHKILLEKP ESPQRQIEAL
RECQ_HAEIN ESYYQETGRA GRDDLPAEAV LFYE.PADYA WLQKILLEKP ETPQRQIEQH

401 450
CSHA_BACSU KEPTLDEALE G......... .......... .......... ..........
RECQ_SYNY3 FLSQASKYLQ R......... .......... .......... ..........
RECQ_BACSU RVLEKTEERD ERRLRDVLLQ .......... .......... ..........
RECQ_ECOLI KLNAMGAFAE AQTCRRLVLL NYFGEGRQEP CGNCDICLDP PKQYDGSTDA
RECQ_PASMU KLQAIGEFAE SQTCRRLVLL NYFGEHQQKP CQNCDICLDP PKQYDGLIDA
RECQ_HAEIN KLEAIGEFAE SQTCRRLVLL NYFGEHRQTP CNNCDICLDP PKKYDGLVDA

451 500
CSHA_BACSU .......... .......... .......... .......... ..........
RECQ_SYNY3 .......... .......... .......... .......... .........A
RECQ_BACSU .......... .......... .......... .......... .YGVGETQAR
RECQ_ECOLI QIALSTIGRV NQRFGMGYVV EVIRGANNQR IRDYGHDKLK VYGMGRDKSH
RECQ_PASMU QKVMSTIYRI GQRFGVHYVI AVLRGLSNQK IKDNQHEQLS VYGIGKDKSK
RECQ_HAEIN QKVMSTIYRV GQCFGAHYVI AVLRGMHNQK IIERQHHKLS VYGIGKDKSK

501 550
CSHA_BACSU .......QQQ VTVERLRTTI SENNLNFYMT AAAELLEDHD AVTVVAAAIK
RECQ_SYNY3 EVLSQQIPSQ GNLGQLKAHF PDLEMALAW. .......... ......LHRR
RECQ_BACSU MMIHLFMQGK TSVELMKKEI SY.RMELKLE K......... ......MHRV
RECQ_ECOLI EHWVSVIRQL IHLGLVTQNI AQ.HSALQLT EAARPVLRGE SSLQLAVPRI
RECQ_PASMU EHWQSVIRQL IHLGFIKQVF DHFNATLQLT ENAKPILRGE QPLSLAMPRI
RECQ_HAEIN EHWQSVIRQL IHLGFVQQVI SELNPTLQLT ESAKVILKGE EPLELAMPRI

551 600
CSHA_BACSU MATKEPDDTP VRLT....DE APMVSKRYKN QRSSKRRDGQ GGGYRG....
RECQ_SYNY3 GNLEWLDPFN YRINPGHYQA NPLEELKSQY RLMTQYLTTS RCRW....QT
RECQ_BACSU SFLLQRD... .....GCLRQ ALLTYFDESY E..PDDGNLP CCSHCGFDLS
RECQ_ECOLI VALKPKA.MQ KSFG.GNYDR KLFAKLRKLR KSIADESNVP ..PYVVFNDA
RECQ_PASMU SSLTSVV.AP QRYAIAQYDK DLFARLRFLR KQIADKENIP ..AYIVFNDA
RECQ_HAEIN SAISKIAHNP QRQGVANYDK DLFARLRFLR KQIADKENIP ..PYIVFNDA

601 650
CSHA_BACSU ...GKGKSNN RSSYDKKRSN DRRSSGDRRQ KKSY...... ..........
RECQ_SYNY3 ILVAFGDNSP AAR......R PCGTCDNCLV GRC....... ..........
RECQ_BACSU LYEQKGERSK MAPLDSWSSE LHRIFSLQTV GELN...... ..........
RECQ_ECOLI TLIEMAEQMP ITASEMLSVN GVGMRKLERF GKPFMALIRA H....VDGDD
RECQ_PASMU TLQEMAQYQP TTKAEMLAIN GVGATKFERF AQPFMQIIQQ HKKVLTQHEP
RECQ_HAEIN TLQEMAQYMP TSNIEMLQIN GVGSIKLERF GQPFMALIQE HKAILANAQN

651 656
CSHA_BACSU ......
RECQ_SYNY3 ......
RECQ_BACSU ......
RECQ_ECOLI ....EE
RECQ_PASMU PLSLES
RECQ_HAEIN ....ND