SDPsite - PF02627

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Äàòà èçìåíåíèÿ: Fri Jun 6 15:47:52 2008
Äàòà èíäåêñèðîâàíèÿ: Mon Oct 1 20:46:39 2012
Êîäèðîâêà:

SDPsite - PF02627

SDPsite: prediction of protein active and specific recognition sites from sequence and structure

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##FAMILY##

This family contains a protein with resolved 3D structure: Q9X1V5_THEMA/22-105, pdb ID: 1p8c. SDPsite predicts following important positions (numbering corresponds to 1p8c):

SDPs:

54S
CPs:

66H, 74G, 41L
Best cluster:

54S, 66H
Second best cluster:

41L, 74G
Mapping predictions onto structure of 1p8c:

Associated grouping:

Group 1

```
Q89IL8_BRAJA/43-126
```
```
Q8YLD1_ANASP/42-125
```
```
Q8UDR5_AGRT5/44-127
```
```
Q98JY9_RHILO/46-129
```

Group 2

```
Q7VTI6_BORPE/91-170
```
```
Q8XYW1_RALSO/93-173
```
```
Q83BM5_COXBU/96-175
```
```
Q8FVW4_BRUSU/94-170
```
```
Q9ANL0_BRAJA/95-178
```
```
Q9A268_CAUCR/95-178
```
```
AHPD_MYCTU/93-176
```
```
Q82IC5_STRAW/94-177
```
```
Q9X5V1_STRVD/94-172
```

Group 3

```
Q9WYF2_THEMA/12-95
```
```
Q8PZ63_METMA/30-113
```
```
Q8PZX1_METMA/20-103
```

Group 4

```
O26169_METTH/26-109
```
```
Q8Q0J3_METMA/14-97
```
```
O29899_ARCFU/36-119
```
```
Q8PYE4_METMA/43-127
```
```
Q8UGQ2_AGRT5/19-101
```
```
Q8Y972_LISMO/15-97
```

Group 5

```
YCO4_PARDE/21-104
```
```
O27018_METTH/13-96
```
```
Q8PYL6_METMA/19-102
```
```
Q8RCV6_THETN/21-104
```
```
Q8PUU3_METMA/18-101
```
```
Q8PYV8_METMA/9-92
```
```
Q8PZJ3_METMA/27-110
```
```
Q8EMR2_OCEIH/135-218
```
```
Q8EMR2_OCEIH/135-218
```
```
Q8NLN6_CORGL/20-105
```
```
Q978P3_THEVO/22-105
```
```
Q9HLI4_THEAC/22-105
```
```
Q81CE2_BACCR/28-111
```
```
O32166_BACSU/32-115
```
```
Q9K796_BACHD/28-111
```
```
Q8PBZ0_XANCP/31-114
```
```
Q9X1V5_THEMA/22-105
```
```
Q54401_STRLA/19-103
```
```
Q89N13_BRAJA/21-105
```
```
Q8DKG6_SYNEL/35-118
```
```
O06800_MYCTU/26-109
```
```
YAC7_ALCEU/24-107
```
```
Q87XC8_PSESM/23-106
```
```
Y1053_HAEIN/24-107
```
```
Q8GQ78_PSEAE/24-107
```
```
Q88K69_PSEPK/28-111
```
```
Q7WQ74_BORBR/23-106
```
```
Q9I5X1_PSEAE/24-106
```
```
Q9JTG8_NEIMA/24-106
```
```
Q89I69_BRAJA/24-107
```
```
Q7P1X7_CHRVO/26-109
```

Group 6

```
P73604_SYNY3/23-107
```
```
Q89PM8_BRAJA/34-118
```
```
O74758_SCHPO/128-205
```
```
YJ81_YEAST/199-283
```
```
Q7VG63_HELHP/216-301
```
```
Q87FG9_VIBPA/158-243
```
```
Q8A7Y1_BACTN/311-396
```
```
Q8TTM1_METAC/27-111
```
```
Q9RVP9_DEIRA/30-114
```
```
Q8FQN1_COREF/33-119
```
```
Q8A8P6_BACTN/142-227
```
```
Q8A7Y1_BACTN/311-396
```
```
Q87FG9_VIBPA/158-243
```
```
Q9PCL2_XYLFA/167-252
```
```
Q930M4_RHIME/308-395
```
```
YNQ5_PARDE/35-121
```
```
Q7VG63_HELHP/216-301
```
```
Q8RN34_CAMJE/39-124
```
```
P71826_MYCTU/26-111
```
```
Q8UH27_AGRT5/28-112
```
```
Q9KXX7_STRCO/38-123
```
```
Q930M4_RHIME/308-395
```
```
O26336_METTH/31-115
```
```
YNQ6_PARDE/40-126
```
```
Q52659_RHOCA/40-126
```
```
Q81RU7_BACAN/19-103
```
```
Q87H24_VIBPA/33-118
```
```
Q8EKK9_SHEON/33-118
```
```
Q7WPY0_BORBR/32-117
```
```
Q8CL33_YERPE/30-114
```
```
Q8E1D2_STRA5/17-102
```
```
Q87WR5_PSESM/34-118
```
```
Q9CE69_LACLA/31-116
```
```
Q930M4_RHIME/308-395
```
```
Q828B2_STRAW/38-123
```
```
Q7NSY1_CHRVO/13-97
```
```
Q8XQ14_RALSO/17-101
```
```
Q9RV26_DEIRA/68-152
```
```
Q7VG56_HELHP/77-162
```
```
Q84H85_9MICC/39-123
```
```
Q930A6_RHIME/168-252
```
```
Q9CFE3_LACLA/16-101
```
```
Q8DV36_STRMU/17-102
```
```
Q8NRJ9_CORGL/17-103
```
```
Q7WNG4_BORBR/34-118
```
```
Q7W0B6_BORPE/40-124
```
```
O67982_RHOOP/297-381
```
```
Q8FN50_COREF/40-124
```
```
DC4C_ACIAD/35-119
```
```
Q8FW21_BRUSU/42-126
```
```
Q9KX42_9RHIZ/39-123
```
```
Q930A6_RHIME/168-252
```
```
Q881M4_PSESM/170-254
```
```
Q8Y1Q8_RALSO/150-234
```
```
Q89LE4_BRAJA/177-261
```
```
Q881M4_PSESM/170-254
```
```
Q88TS1_LACPL/17-102
```
```
Q8EWL7_MYCPE/18-103
```
```
Q88GS0_PSEPK/34-118
```
```
Q8KL13_RHIET/51-135
```
```
Q8KL33_RHIET/67-151
```
```
Q9L5A7_9PROT/34-118
```
```
Q9L5B1_9RHOB/33-117
```
```
Q89LE4_BRAJA/177-261
```
```
Q8Y1Q8_RALSO/150-234
```
```
Q7WNR4_BORBR/34-118
```
```
O86608_STRCO/355-439
```
```
Q82MF4_STRAW/285-369
```
```
Q89UN1_BRAJA/34-118
```
```
Q89IH0_BRAJA/35-120
```
```
Q9A5N6_CAUCR/302-387
```
```
Q8XX67_RALSO/35-119
```
```
Q7WPN1_BORBR/34-118
```
```
Q88N35_PSEPK/35-119
```
```
Q8PDG7_XANCP/35-119
```
```
Q8D1N8_YERPE/49-133
```
```
Q8UK98_AGRT5/34-118
```
```
Q97UW0_SULSO/43-128
```

Group 7

```
Y1511_METJA/18-101
```
```
Q8TXW6_METKA/29-113
```
```
O26787_METTH/36-120
```
```
Y742_METJA/19-103
```
```
Q8PSC4_METMA/27-113
```
```
Q8TP59_METAC/27-113
```

Group 8

```
Q82QS6_STRAW/57-140
```
```
Q8TN24_METAC/40-121
```
```
Q89SZ5_BRAJA/50-134
```
```
Q89RQ0_BRAJA/34-116
```
```
O53905_MYCTU/40-123
```
```
Q89NA9_BRAJA/36-119
```
```
Q9A3V6_CAUCR/52-136
```
```
Q7WNI3_BORBR/39-122
```
```
Q872E4_NEUCR/44-109
```

Group 9

```
Q82MM5_STRAW/103-186
```
```
Q7USN7_RHOBA/41-121
```
```
Q7NI16_GLOVI/40-125
```
```
Q8NUW4_STAAW/10-92
```
```
Q7P0I8_CHRVO/10-92
```
```
Q8FER3_ECOL6/13-95
```
```
Q7VW83_BORPE/12-94
```
```
Q93HH4_STRAW/42-128
```
```
Q9RJG5_STRCO/31-117
```
```
Q8FN71_COREF/14-100
```
```
Q8NN44_CORGL/15-100
```
```
Q9RDI4_STRCO/14-96
```
```
Q89CI6_BRAJA/13-94
```
```
Q98L97_RHILO/13-95
```
```
Q7NXV7_CHRVO/15-94
```
```
Q840R0_9GAMM/10-95
```
```
Q7NMU5_GLOVI/47-129
```
```
Q9I6M1_PSEAE/12-94
```
```
Q82PT4_STRAW/14-96
```
```
Q9FC57_STRCO/14-95
```
```
Q8D7H9_VIBVU/12-94
```
```
P96684_BACSU/12-94
```
```
Q7WHA8_BORBR/12-94
```
```
Q98K47_RHILO/12-94
```
```
Q9KZB1_STRCO/28-109
```
```
Q89D50_BRAJA/12-94
```
```
Q89M11_BRAJA/16-98
```
```
Q82A02_STRAW/34-115
```
```
Q92XD0_RHIME/12-93
```
```
Q987X0_RHILO/12-95
```
```
Q8UI08_AGRT5/12-94
```
```
Q92S80_RHIME/12-94
```
```
Q9KZB2_STRCO/10-92
```
```
Q7WN29_BORBR/12-94
```
```
Q89PR3_BRAJA/12-94
```

Group 10

```
Q8GMC9_STRGL/56-141
```
```
Q9RTJ7_DEIRA/77-160
```
```
Q89F01_BRAJA/58-143
```
```
Q881R7_PSESM/57-141
```
```
Q8FN18_COREF/270-361
```
```
Q8NMX8_CORGL/269-355
```
```
Q89XS3_BRAJA/55-139
```
```
Q8UJP9_AGRT5/55-127
```

Group 11

```
Q7MJJ5_VIBVY/55-138
```
```
Q7ULD6_RHOBA/54-137
```
```
Q88IP0_PSEPK/41-115
```
```
Q7NX57_CHRVO/41-125
```
```
Q53427_LEGPN/38-123
```
```
Q7WJL9_BORBR/42-124
```

Group 12

```
Q9JUP9_NEIMA/41-123
```
```
Q7UTX7_RHOBA/162-245
```
```
Q8ZSI6_ANASP/44-126
```
```
Q8DUG8_STRMU/42-124
```
```
Q8RR45_STRSU/50-134
```
```
Q9I1E7_PSEAE/38-118
```
```
Q88GS9_PSEPK/72-155
```