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Дата изменения: Fri Jun 6 15:47:42 2008
Дата индексирования: Mon Oct 1 20:03:08 2012
Кодировка:
SDPsite - PF00582

SDPsite: prediction of protein active and specific recognition sites from sequence and structure

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##FAMILY##

This family contains a protein with resolved 3D structure: Y577_METJA/4-158, pdb ID: 1mjh. SDPsite predicts following important positions (numbering corresponds to 1mjh):

  • SDPs:

    15S, 128S

  • CPs:

    127G, 124I, 125I, 122D, 146V, 41V

  • Best cluster:

    124I, 125I, 127G, 128S

  • Second best cluster:

    15S, 41V, 146V

  • Mapping predictions onto structure of 1mjh:

  • Associated grouping:

    • Group 1

      • Y2346_MYCBO/150-291
      • Q8NLF3_CORGL/167-312
      • Y2346_MYCBO/150-291
      • Q8NLF3_CORGL/167-312
    • Group 2

      • Q8PZG4_METMA/450-584
      • Q9HHY0_HALN1/8-134
      • Q9K908_BACHD/401-530
      • Q8YR81_ANASP/422-552
      • P74477_SYNY3/598-731
      • Q8KPT6_SYNP7/583-717
      • Q8YZ31_ANASP/424-557
      • O28661_ARCFU/469-598
      • Q9HSL5_HALN1/477-616
    • Group 3

      • P72937_SYNY3/1-134
      • O06188_MYCTU/8-140
      • Q98C32_RHILO/12-151
      • Q92KR6_RHIME/4-143
      • Q8PZG4_METMA/450-584
      • Q9HHY0_HALN1/8-134
      • O28661_ARCFU/469-598
      • Q9HSL5_HALN1/477-616
      • Q8YZ31_ANASP/424-557
      • Q55736_SYNY3/568-694
    • Group 4

      • Q9I2V3_PSEAE/131-272
      • USPE_HAEIN/2-149
      • USPE_SALTI/2-145
      • Q9HW73_PSEAE/151-299
    • Group 5

      • Q8PCL9_XANCP/248-372
      • Q9L134_STRCO/419-556
      • Q9R6W8_ANASL/232-357
      • KDPD_SYNY3/243-368
      • Q8R869_THETN/249-377
      • Q9RZN5_DEIRA/239-363
      • Q98GX8_RHILO/253-378
      • Q92XJ2_RHIME/253-367
      • O54137_STRCO/230-356
      • KDPD_MYCTU/253-377
    • Group 6

      • Q9LU98_ARATH/1-148
      • Q9KN07_VIBCH/149-302
      • Q9I2V3_PSEAE/131-272
      • Q9HW73_PSEAE/151-299
      • Q9ZVV9_ARATH/8-156
      • O64554_ARATH/15-153
      • Q9LJX9_ARATH/14-151
      • Q9ZPQ9_ARATH/1-143
      • O80661_ARATH/47-181
      • Q9LQB2_ARATH/43-200
      • Q9M9P7_ARATH/105-251
      • Q9M998_ARATH/3-137
      • Q9ASJ5_ORYSA/2-131
    • Group 7

      • Q8TWI3_METKA/3-127
      • Q8YWH9_ANASP/164-287
      • Q8RKZ6_PRORE/163-283
      • O07487_YEREN/162-275
      • Q9RBV8_9PSED/163-283
    • Group 8

      • O28514_ARCFU/145-265
      • Q97BF4_THEVO/11-138
      • Q93IH4_WOLSU/5-137
      • Q8ZWK8_PYRAE/12-141
      • Q971K3_SULTO/12-135
      • Q9FBT6_STRCO/30-166
      • Q9I010_PSEAE/1-141
      • Q97B14_THEVO/1-143
      • USPA_SALTI/1-137
      • USPD_ECOLI/2-138
      • Q8KKU4_RHIET/150-273
      • O67136_AQUAE/157-275
      • Q8XZA0_RALSO/1-146
      • O67136_AQUAE/157-275
      • Q97AU3_THEVO/1-141
      • Q9HJT7_THEAC/1-141
      • P72700_SYNY3/1-132
      • P72700_SYNY3/1-132
      • Y1654_SYNY3/22-157
      • Q9SIJ8_ARATH/39-167
      • YXIE_BACSU/1-148
      • O59577_PYRHO/1-149
      • Q8KE92_CHLTE/3-142
      • Q9RSJ2_DEIRA/1-140
      • Q9JYN4_NEIMB/1-148
      • Q9HYT5_PSEAE/1-149
      • Q9S167_STRGR/36-173
      • Q9RCX3_STRCO/16-153
      • Q8NQM7_CORGL/1-151
      • Q8YWL5_ANASP/1-139
      • O81835_ARATH/43-204
      • O74782_SCHPO/138-277
      • YFK5_SCHPO/432-569
      • Q9A8A2_CAUCR/163-280
      • Q92Z65_RHIME/180-304
      • Q9RBV8_9PSED/163-283
      • Y1230_SYNY3/164-287
      • Q8YWH9_ANASP/164-287
      • Q9HHV8_HALN1/1-139
      • Q9HNX9_HALN1/10-150
      • Q9K823_BACHD/1-141
      • Q9CEI3_LACLA/4-143
      • Q9KFR2_BACHD/1-137
      • Q99TF7_STAAM/1-137
      • O26256_METTH/1-131
      • Q8KDN4_CHLTE/3-133
      • Q8UI04_AGRT5/1-144
      • Q8YDD2_BRUME/1-148
      • Q8Y2Z7_RALSO/1-146
      • Q9I2Y4_PSEAE/1-156
      • Q9RRW9_DEIRA/17-155
      • Q9HUE2_PSEAE/1-127
      • Q9HW49_PSEAE/1-132
      • Y1916_COXBU/3-142
      • Q9HZI9_PSEAE/2-141
      • Q9HUE2_PSEAE/1-127
      • Q9HW49_PSEAE/1-132
      • O06153_MYCTU/3-144
      • Q8NQQ6_CORGL/4-144
      • Y1388_SYNY3/2-153
      • Q94E74_ORYSA/10-164
      • Q9C9G5_ARATH/9-157
      • Q93W91_ARATH/6-156
      • O82240_ARATH/10-156
      • Q9LSP5_ARATH/6-160
      • Q79EB9_BRAJA/151-277
      • Q988T2_RHILO/147-261
      • Q8Y2Z6_RALSO/153-279
      • Q8RKZ6_PRORE/163-283
      • Q92RA8_RHIME/1-140
      • Q8UGY1_AGRT5/18-153
      • O28514_ARCFU/145-265
      • Q8KG62_CHLTE/8-136
      • Y1154_METTH/4-144
      • Q8TYZ9_METKA/1-143
      • Q9CJC2_LACLA/4-155
      • Q8TXY7_METKA/1-139
      • Q8XQR2_RALSO/1-146
      • Q8XZN6_RALSO/25-168
      • Q8P3P5_XANCP/1-148
      • Q8YJI1_BRUME/1-149
      • Q8XSZ9_RALSO/1-146
      • Q8XPS7_RALSO/1-146
      • O06189_MYCTU/158-293
      • Q8NLJ9_CORGL/153-294
      • Q9RIY4_STRCO/29-166
      • Q8YYU6_ANASP/1-157
      • Q8S292_ORYSA/7-160
      • O86058_AZOBR/65-191
      • O07487_YEREN/162-275
      • Q8KK66_PROVU/167-285
      • USPF_ECOLI/1-144
      • USPG_ECOLI/1-142
      • Q9KUT7_VIBCH/1-142
      • Y577_METJA/4-158
      • Q8YUS0_ANASP/416-537
      • Q9HMJ0_HALN1/9-145
      • Q8R8U1_THETN/1-139
      • Q92EE5_LISIN/3-143
      • Q97NM4_STRPN/4-144
      • Q9CFU3_LACLA/4-141
      • Q9CH60_LACLA/4-141
      • Q8ZYP1_PYRAE/6-133
      • YQA3_THEAQ/1-137
      • Q8ZVA3_PYRAE/1-136
      • Q8RQ07_DESGI/1-140
      • Q970S8_SULTO/16-157
      • Q8NLJ9_CORGL/153-294
      • Q9K4H8_STRCO/2-137
      • Q9RIZ8_STRCO/4-142
      • Q9RIY5_STRCO/1-139
      • Q9RIZ3_STRCO/6-143
      • Q9RI41_STRCO/2-136
      • Q9K4H8_STRCO/2-137
      • Q8ZSC3_ANASP/1-157
      • Q9M9P5_ARATH/3-157
      • Q9M328_ARATH/4-157
      • Q92J11_RICCN/6-146
      • Q9CNF8_PASMU/1-140
      • O28345_ARCFU/156-281
      • O59231_PYRHO/81-206
      • Q9HP90_HALN1/1-139
      • Q9HPP5_HALN1/3-143
      • Q92BD5_LISIN/4-144
      • Q927G8_LISIN/3-143
      • Q9CDI4_LACLA/4-144
      • Q9CEK4_LACLA/4-144
      • Q96Y05_SULTO/1-130
      • NHAX_BACSU/3-166
      • Q9RIY4_STRCO/29-166
      • Q9K4L5_STRCO/23-158
      • Q9K4L5_STRCO/23-158
      • Q8YXT9_ANASP/1-157
      • Y1101_SYNY3/1-105
      • O30726_RHOCA/155-279
      • Q92Z39_RHIME/152-274
      • Q8YH66_BRUME/155-281
      • O58553_PYRHO/4-155
      • Q8PYW0_METMA/150-278
      • O28345_ARCFU/156-281
      • Q8U0M9_PYRFU/1-133
      • Q9HPQ8_HALN1/1-138
      • Y531_METJA/25-165
      • Y1996_MYCTU/6-159
      • O06188_MYCTU/8-140
      • Q9RIZ8_STRCO/4-142
      • Q9RIY5_STRCO/1-139
      • Q98NH2_RHILO/151-277
      • Q8UEM7_AGRT5/154-281
      • Q9HRP5_HALN1/1-144
      • Q9HPF7_HALN1/1-138
      • Y2028_MYCBO/6-148
      • O53474_MYCTU/7-141
      • P95192_MYCTU/6-137
      • O27137_METTH/1-147
      • Q8Q0T2_METMA/5-145
      • O06189_MYCTU/158-293
      • O53472_MYCTU/7-148
      • O26984_METTH/1-143
      • O27074_METTH/1-143
      • Q8PSK2_METMA/5-145
      • Q8Q0L3_METMA/5-148
      • Q8PWX3_METMA/5-146
      • Q8PWX0_METMA/11-152
      • Q8PU34_METMA/8-149
      • Q8PWX5_METMA/5-141
    • Group 9

      • Q98IS7_RHILO/588-717
      • Q9HMI7_HALN1/9-130
      • Q9HRD8_HALN1/22-168
      • Q988V2_RHILO/334-475
      • Q9U5H0_ACACA/35-166
      • O29275_ARCFU/1-130
      • O29432_ARCFU/2-134
    • Group 10

      • O66730_AQUAE/306-433
      • Q9YFW0_AERPE/117-242
      • Q8Y2Z6_RALSO/153-279
      • O67022_AQUAE/3-148
      • Q98NH2_RHILO/151-277
      • Q8YH66_BRUME/155-281
      • Y031_HELPY/1-137
      • O34252_WOLSU/1-138