SDPsite - PF00582

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Äàòà èçìåíåíèÿ: Fri Jun 6 15:47:42 2008
Äàòà èíäåêñèðîâàíèÿ: Mon Oct 1 20:03:08 2012
Êîäèðîâêà:

SDPsite - PF00582

SDPsite: prediction of protein active and specific recognition sites from sequence and structure

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##FAMILY##

This family contains a protein with resolved 3D structure: Y577_METJA/4-158, pdb ID: 1mjh. SDPsite predicts following important positions (numbering corresponds to 1mjh):

SDPs:

15S, 128S
CPs:

127G, 124I, 125I, 122D, 146V, 41V
Best cluster:

124I, 125I, 127G, 128S
Second best cluster:

15S, 41V, 146V
Mapping predictions onto structure of 1mjh:

Associated grouping:

Group 1

```
Y2346_MYCBO/150-291
```
```
Q8NLF3_CORGL/167-312
```
```
Y2346_MYCBO/150-291
```
```
Q8NLF3_CORGL/167-312
```

Group 2

```
Q8PZG4_METMA/450-584
```
```
Q9HHY0_HALN1/8-134
```
```
Q9K908_BACHD/401-530
```
```
Q8YR81_ANASP/422-552
```
```
P74477_SYNY3/598-731
```
```
Q8KPT6_SYNP7/583-717
```
```
Q8YZ31_ANASP/424-557
```
```
O28661_ARCFU/469-598
```
```
Q9HSL5_HALN1/477-616
```

Group 3

```
P72937_SYNY3/1-134
```
```
O06188_MYCTU/8-140
```
```
Q98C32_RHILO/12-151
```
```
Q92KR6_RHIME/4-143
```
```
Q8PZG4_METMA/450-584
```
```
Q9HHY0_HALN1/8-134
```
```
O28661_ARCFU/469-598
```
```
Q9HSL5_HALN1/477-616
```
```
Q8YZ31_ANASP/424-557
```
```
Q55736_SYNY3/568-694
```

Group 4

```
Q9I2V3_PSEAE/131-272
```
```
USPE_HAEIN/2-149
```
```
USPE_SALTI/2-145
```
```
Q9HW73_PSEAE/151-299
```

Group 5

```
Q8PCL9_XANCP/248-372
```
```
Q9L134_STRCO/419-556
```
```
Q9R6W8_ANASL/232-357
```
```
KDPD_SYNY3/243-368
```
```
Q8R869_THETN/249-377
```
```
Q9RZN5_DEIRA/239-363
```
```
Q98GX8_RHILO/253-378
```
```
Q92XJ2_RHIME/253-367
```
```
O54137_STRCO/230-356
```
```
KDPD_MYCTU/253-377
```

Group 6

```
Q9LU98_ARATH/1-148
```
```
Q9KN07_VIBCH/149-302
```
```
Q9I2V3_PSEAE/131-272
```
```
Q9HW73_PSEAE/151-299
```
```
Q9ZVV9_ARATH/8-156
```
```
O64554_ARATH/15-153
```
```
Q9LJX9_ARATH/14-151
```
```
Q9ZPQ9_ARATH/1-143
```
```
O80661_ARATH/47-181
```
```
Q9LQB2_ARATH/43-200
```
```
Q9M9P7_ARATH/105-251
```
```
Q9M998_ARATH/3-137
```
```
Q9ASJ5_ORYSA/2-131
```

Group 7

```
Q8TWI3_METKA/3-127
```
```
Q8YWH9_ANASP/164-287
```
```
Q8RKZ6_PRORE/163-283
```
```
O07487_YEREN/162-275
```
```
Q9RBV8_9PSED/163-283
```

Group 8

```
O28514_ARCFU/145-265
```
```
Q97BF4_THEVO/11-138
```
```
Q93IH4_WOLSU/5-137
```
```
Q8ZWK8_PYRAE/12-141
```
```
Q971K3_SULTO/12-135
```
```
Q9FBT6_STRCO/30-166
```
```
Q9I010_PSEAE/1-141
```
```
Q97B14_THEVO/1-143
```
```
USPA_SALTI/1-137
```
```
USPD_ECOLI/2-138
```
```
Q8KKU4_RHIET/150-273
```
```
O67136_AQUAE/157-275
```
```
Q8XZA0_RALSO/1-146
```
```
O67136_AQUAE/157-275
```
```
Q97AU3_THEVO/1-141
```
```
Q9HJT7_THEAC/1-141
```
```
P72700_SYNY3/1-132
```
```
P72700_SYNY3/1-132
```
```
Y1654_SYNY3/22-157
```
```
Q9SIJ8_ARATH/39-167
```
```
YXIE_BACSU/1-148
```
```
O59577_PYRHO/1-149
```
```
Q8KE92_CHLTE/3-142
```
```
Q9RSJ2_DEIRA/1-140
```
```
Q9JYN4_NEIMB/1-148
```
```
Q9HYT5_PSEAE/1-149
```
```
Q9S167_STRGR/36-173
```
```
Q9RCX3_STRCO/16-153
```
```
Q8NQM7_CORGL/1-151
```
```
Q8YWL5_ANASP/1-139
```
```
O81835_ARATH/43-204
```
```
O74782_SCHPO/138-277
```
```
YFK5_SCHPO/432-569
```
```
Q9A8A2_CAUCR/163-280
```
```
Q92Z65_RHIME/180-304
```
```
Q9RBV8_9PSED/163-283
```
```
Y1230_SYNY3/164-287
```
```
Q8YWH9_ANASP/164-287
```
```
Q9HHV8_HALN1/1-139
```
```
Q9HNX9_HALN1/10-150
```
```
Q9K823_BACHD/1-141
```
```
Q9CEI3_LACLA/4-143
```
```
Q9KFR2_BACHD/1-137
```
```
Q99TF7_STAAM/1-137
```
```
O26256_METTH/1-131
```
```
Q8KDN4_CHLTE/3-133
```
```
Q8UI04_AGRT5/1-144
```
```
Q8YDD2_BRUME/1-148
```
```
Q8Y2Z7_RALSO/1-146
```
```
Q9I2Y4_PSEAE/1-156
```
```
Q9RRW9_DEIRA/17-155
```
```
Q9HUE2_PSEAE/1-127
```
```
Q9HW49_PSEAE/1-132
```
```
Y1916_COXBU/3-142
```
```
Q9HZI9_PSEAE/2-141
```
```
Q9HUE2_PSEAE/1-127
```
```
Q9HW49_PSEAE/1-132
```
```
O06153_MYCTU/3-144
```
```
Q8NQQ6_CORGL/4-144
```
```
Y1388_SYNY3/2-153
```
```
Q94E74_ORYSA/10-164
```
```
Q9C9G5_ARATH/9-157
```
```
Q93W91_ARATH/6-156
```
```
O82240_ARATH/10-156
```
```
Q9LSP5_ARATH/6-160
```
```
Q79EB9_BRAJA/151-277
```
```
Q988T2_RHILO/147-261
```
```
Q8Y2Z6_RALSO/153-279
```
```
Q8RKZ6_PRORE/163-283
```
```
Q92RA8_RHIME/1-140
```
```
Q8UGY1_AGRT5/18-153
```
```
O28514_ARCFU/145-265
```
```
Q8KG62_CHLTE/8-136
```
```
Y1154_METTH/4-144
```
```
Q8TYZ9_METKA/1-143
```
```
Q9CJC2_LACLA/4-155
```
```
Q8TXY7_METKA/1-139
```
```
Q8XQR2_RALSO/1-146
```
```
Q8XZN6_RALSO/25-168
```
```
Q8P3P5_XANCP/1-148
```
```
Q8YJI1_BRUME/1-149
```
```
Q8XSZ9_RALSO/1-146
```
```
Q8XPS7_RALSO/1-146
```
```
O06189_MYCTU/158-293
```
```
Q8NLJ9_CORGL/153-294
```
```
Q9RIY4_STRCO/29-166
```
```
Q8YYU6_ANASP/1-157
```
```
Q8S292_ORYSA/7-160
```
```
O86058_AZOBR/65-191
```
```
O07487_YEREN/162-275
```
```
Q8KK66_PROVU/167-285
```
```
USPF_ECOLI/1-144
```
```
USPG_ECOLI/1-142
```
```
Q9KUT7_VIBCH/1-142
```
```
Y577_METJA/4-158
```
```
Q8YUS0_ANASP/416-537
```
```
Q9HMJ0_HALN1/9-145
```
```
Q8R8U1_THETN/1-139
```
```
Q92EE5_LISIN/3-143
```
```
Q97NM4_STRPN/4-144
```
```
Q9CFU3_LACLA/4-141
```
```
Q9CH60_LACLA/4-141
```
```
Q8ZYP1_PYRAE/6-133
```
```
YQA3_THEAQ/1-137
```
```
Q8ZVA3_PYRAE/1-136
```
```
Q8RQ07_DESGI/1-140
```
```
Q970S8_SULTO/16-157
```
```
Q8NLJ9_CORGL/153-294
```
```
Q9K4H8_STRCO/2-137
```
```
Q9RIZ8_STRCO/4-142
```
```
Q9RIY5_STRCO/1-139
```
```
Q9RIZ3_STRCO/6-143
```
```
Q9RI41_STRCO/2-136
```
```
Q9K4H8_STRCO/2-137
```
```
Q8ZSC3_ANASP/1-157
```
```
Q9M9P5_ARATH/3-157
```
```
Q9M328_ARATH/4-157
```
```
Q92J11_RICCN/6-146
```
```
Q9CNF8_PASMU/1-140
```
```
O28345_ARCFU/156-281
```
```
O59231_PYRHO/81-206
```
```
Q9HP90_HALN1/1-139
```
```
Q9HPP5_HALN1/3-143
```
```
Q92BD5_LISIN/4-144
```
```
Q927G8_LISIN/3-143
```
```
Q9CDI4_LACLA/4-144
```
```
Q9CEK4_LACLA/4-144
```
```
Q96Y05_SULTO/1-130
```
```
NHAX_BACSU/3-166
```
```
Q9RIY4_STRCO/29-166
```
```
Q9K4L5_STRCO/23-158
```
```
Q9K4L5_STRCO/23-158
```
```
Q8YXT9_ANASP/1-157
```
```
Y1101_SYNY3/1-105
```
```
O30726_RHOCA/155-279
```
```
Q92Z39_RHIME/152-274
```
```
Q8YH66_BRUME/155-281
```
```
O58553_PYRHO/4-155
```
```
Q8PYW0_METMA/150-278
```
```
O28345_ARCFU/156-281
```
```
Q8U0M9_PYRFU/1-133
```
```
Q9HPQ8_HALN1/1-138
```
```
Y531_METJA/25-165
```
```
Y1996_MYCTU/6-159
```
```
O06188_MYCTU/8-140
```
```
Q9RIZ8_STRCO/4-142
```
```
Q9RIY5_STRCO/1-139
```
```
Q98NH2_RHILO/151-277
```
```
Q8UEM7_AGRT5/154-281
```
```
Q9HRP5_HALN1/1-144
```
```
Q9HPF7_HALN1/1-138
```
```
Y2028_MYCBO/6-148
```
```
O53474_MYCTU/7-141
```
```
P95192_MYCTU/6-137
```
```
O27137_METTH/1-147
```
```
Q8Q0T2_METMA/5-145
```
```
O06189_MYCTU/158-293
```
```
O53472_MYCTU/7-148
```
```
O26984_METTH/1-143
```
```
O27074_METTH/1-143
```
```
Q8PSK2_METMA/5-145
```
```
Q8Q0L3_METMA/5-148
```
```
Q8PWX3_METMA/5-146
```
```
Q8PWX0_METMA/11-152
```
```
Q8PU34_METMA/8-149
```
```
Q8PWX5_METMA/5-141
```

Group 9

```
Q98IS7_RHILO/588-717
```
```
Q9HMI7_HALN1/9-130
```
```
Q9HRD8_HALN1/22-168
```
```
Q988V2_RHILO/334-475
```
```
Q9U5H0_ACACA/35-166
```
```
O29275_ARCFU/1-130
```
```
O29432_ARCFU/2-134
```

Group 10

```
O66730_AQUAE/306-433
```
```
Q9YFW0_AERPE/117-242
```
```
Q8Y2Z6_RALSO/153-279
```
```
O67022_AQUAE/3-148
```
```
Q98NH2_RHILO/151-277
```
```
Q8YH66_BRUME/155-281
```
```
Y031_HELPY/1-137
```
```
O34252_WOLSU/1-138
```