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оригинального документа
: http://npidb.belozersky.msu.ru/families/contacttypes.html
Дата изменения: Unknown Дата индексирования: Sat Apr 9 22:26:18 2016 Кодировка: |
| SCOP family |
Method
|
Quality
|
| CAP C-terminal domain-like | SSM | middle |
| Heat-shock transcription factor | SSM | middle |
| GerE-like (LuxR/UhpA family of transcriptional regulators) | SSM | middle |
| Myb/SANT domain | SSM | low |
| Penicillinase repressor | SSM | high |
| Transcription factor IIB (TFIIB), core domain | SSM | low |
| Methylated DNA-protein cysteine methyltransferase, C-terminal domain | SSM | high |
| Replication terminator protein (RTP) | SSM | high |
| Iron-dependent repressor protein | SSM | high |
| Spo0A | SSM | middle |
| KorB DNA-binding domain-like | SSM | middle |
| POU-specific domain | SSM | middle |
| Interferon regulatory factor | SSM | middle |
| Restriction endonuclease BglII | SSM | high |
| Intein endonuclease | SSM | low |
| Restriction endonuclease MspI | SSM | high |
| SMAD MH1 domain | SSM | high |
| Met repressor, MetJ (MetR) | SSM | high |
| CopG-like | SSM | high |
| Arc/Mnt-like phage repressors | SSM | high |
| TBP-associated factors, TAFs | SSM | middle |
| TATA-box binding protein (TBP), C-terminal domain | SSM | middle |
| Middle domain of MutM-like DNA repair proteins | SSM | middle |
| 3-methyladenine DNA glycosylase (AAG, ANPG, MPG) | SSM | high |
| DNA-binding protein LAG-1 (CSL) | SSM | high |
| Chromosomal replication initiation factor DnaA C-terminal domain IV | SSM | middle |
| Paired domain | SSM | low |
| SRF-like | SSM | low |
| DNA-binding N-terminal domain of transcription activators | SSM | middle |
| Trp repressor, TrpR | SSM | high |
| Recombinase DNA-binding domain | SSM | low |
| Viral DNA-binding domain | SSM | middle |
| 39 kda initiator binding protein, IBP39, N-terminal domain | SSM | high |
| Centromere-binding | SSM | low |
| Very short patch repair (VSR) endonuclease | SSM | middle |
| HNH-motif | SSM | middle |
| Excisionase-like | SSM | middle |
| Restriction endonuclease FokI, N-terminal (recognition) domain | SSM | high |
| Lambda integrase-like, catalytic core | SSM | low |
| p53 DNA-binding domain-like | SSM | middle |
| GntR-like transcriptional regulators | SSM | high |
| Zn2/Cys6 DNA-binding domain | SSM | low |
| Replication initiation protein | SSM | low |
| Restriction endonuclease NgoIV | SSM | high |
| DNA-binding domain of rap1 | SSM | middle |
| ets domain | SSM | middle |
| DNA-binding domain of intron-encoded endonucleases | SSM | middle |
| DNA-binding domain from NDT80 | SSM | high |
| PhoB-like | SSM | middle |
| Nuclear receptor | SSM | middle |
| Intron-encoded homing endonucleases | SSM | high |
| RUNT domain | SSM | low |
| Replication terminator protein (Tus) | SSM | high |
| P4 origin-binding domain-like | SSM | middle |
| Restriction endonuclease BamHI | SSM | high |
| Restriction endonuclease PvuII | SSM | high |
| STAT DNA-binding domain | SSM | middle |
| Replication modulator SeqA, C-terminal DNA-binding domain | SSM | high |
| C5 cytosine-specific DNA methylase, DCM | SSM | middle |
| Transposase inhibitor (Tn5 transposase) | SSM | middle |
| T4 endonuclease V | SSM | high |
| DNA repair glycosylase, 2 C-terminal domains | SSM | high |
| Endonuclease III | SSM | middle |
| Uracil-DNA glycosylase | SSM | high |
| Prokaryotic DNA-bending protein | SSM | low |
| DNA repair protein MutS, domain I | SSM | middle |
| N-terminal domain of MutM-like DNA repair proteins | SSM | middle |
| Mismatch glycosylase | SSM | middle |
| Restriction endonuclease HincII | SSM | high |
| T-box | SSM | middle |
| DNA repair protein MutS, domain III | SSM | middle |
| Restriction endonuclease FokI, C-terminal (catalytic) domain | SSM | high |
| C-terminal domain of RNA polymerase alpha subunit | SSM | middle |
| Replication initiation protein E1 | SSM | high |
| Eukaryotic DNA topoisomerase I, dispensable insert domain | SSM | middle |
| Transcription factor IIA (TFIIA), beta-barrel domain | SSM | middle |
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