Документ взят из кэша поисковой машины. Адрес оригинального документа : http://mouse.belozersky.msu.ru/npidb/data/pdb_new/stride/7gat.std.txt Дата изменения: Fri May 25 14:38:05 2012 Дата индексирования: Tue Oct 2 12:47:37 2012 Кодировка:

REM -------------------------------------------------------------------- 7GAT
REM 7GAT
REM STRIDE: Knowledge-based secondary structure assignment 7GAT
REM Please cite: D.Frishman & P.Argos, Proteins 23, 566-579, 1995 7GAT
REM 7GAT
REM Residue accessible surface area calculation 7GAT
REM Please cite: F.Eisenhaber & P.Argos, J.Comp.Chem. 14, 1272-1280, 1993 7GAT
REM F.Eisenhaber et al., J.Comp.Chem., 1994, submitted 7GAT
REM 7GAT
REM ------------------------ General information ----------------------- 7GAT
REM 7GAT
HDR TRANSCRIPTION/DNA 07-NOV-97 7GAT 7GAT
CMP MOL_ID: 1; 7GAT
CMP MOLECULE: DNA (5'- 7GAT
CMP D(*CP*AP*GP*TP*GP*AP*TP*AP*GP*AP*GP*AP*C)-3'); 7GAT
CMP CHAIN: B; 7GAT
CMP ENGINEERED: YES; 7GAT
CMP MOL_ID: 2; 7GAT
CMP MOLECULE: DNA (5'- 7GAT
CMP D(*GP*TP*CP*TP*CP*TP*AP*TP*CP*AP*CP*TP*G)-3'); 7GAT
CMP CHAIN: C; 7GAT
CMP ENGINEERED: YES; 7GAT
CMP MOL_ID: 3; 7GAT
CMP MOLECULE: NITROGEN REGULATORY PROTEIN AREA; 7GAT
CMP CHAIN: A; 7GAT
CMP FRAGMENT: DNA BINDING DOMAIN; 7GAT
CMP ENGINEERED: YES; 7GAT
CMP MUTATION: YES 7GAT
SRC MOL_ID: 1; 7GAT
SRC SYNTHETIC: YES; 7GAT
SRC MOL_ID: 2; 7GAT
SRC SYNTHETIC: YES; 7GAT
SRC MOL_ID: 3; 7GAT
SRC ORGANISM_SCIENTIFIC: EMERICELLA NIDULANS; 7GAT
SRC ORGANISM_TAXID: 162425; 7GAT
SRC GENE: POTENTIAL; 7GAT
SRC EXPRESSION_SYSTEM: ESCHERICHIA COLI; 7GAT
SRC EXPRESSION_SYSTEM_TAXID: 562 7GAT
AUT G.M.CLORE,M.STARICH,M.WIKSTROM,A.M.GRONENBORN 7GAT
REM 7GAT
REM -------------------- Secondary structure summary ------------------- 7GAT
REM 7GAT
CHN /data/npidb/pdb/pdb_new/all/pdb7gat.pdb A 7GAT
REM 7GAT
REM . . . . . 7GAT
SEQ 1 MKNGEQNGPTTCTNCFTQTTPVWRRNPEGQPLCNACGLFLKLHGVVRPLS 50 7GAT
STR TTTTTT TTTTT TTTTEEETTTEEE HHHHHHHHHH GG 7GAT
REM 7GAT
REM . 7GAT
SEQ 51 LKTDVIKKRNRNSANS 66 7GAT
STR G 7GAT
REM 7GAT
REM 7GAT
REM 7GAT
LOC AlphaHelix ASN 34 A HIS 43 A 7GAT
LOC 310Helix LEU 49 A LEU 51 A 7GAT
LOC Strand ARG 24 A ASN 26 A 7GAT
LOC Strand GLN 30 A LEU 32 A 7GAT
LOC TurnVIII MET 1 A GLY 4 A 7GAT
LOC TurnVIII ASN 3 A GLN 6 A 7GAT
LOC TurnI CYS 12 A CYS 15 A 7GAT
LOC TurnIV THR 13 A PHE 16 A 7GAT
LOC TurnVIII THR 20 A TRP 23 A 7GAT
LOC TurnI ASN 26 A GLY 29 A 7GAT
REM 7GAT
REM --------------- Detailed secondary structure assignment------------- 7GAT
REM 7GAT
REM |---Residue---| |--Structure--| |-Phi-| |-Psi-| |-Area-| 7GAT
ASG MET A 1 1 T Turn 360.00 -67.71 212.4 7GAT
ASG LYS A 2 2 T Turn -60.41 -40.30 212.1 7GAT
ASG ASN A 3 3 T Turn -85.21 145.70 77.1 7GAT
ASG GLY A 4 4 T Turn -78.26 -24.17 92.6 7GAT
ASG GLU A 5 5 T Turn -143.70 147.59 139.2 7GAT
ASG GLN A 6 6 T Turn -71.91 -21.36 155.9 7GAT
ASG ASN A 7 7 C Coil -45.09 174.04 123.6 7GAT
ASG GLY A 8 8 C Coil 164.56 168.31 36.3 7GAT
ASG PRO A 9 9 C Coil -80.10 -6.35 126.4 7GAT
ASG THR A 10 10 C Coil -59.98 119.95 62.9 7GAT
ASG THR A 11 11 C Coil -139.14 137.75 59.2 7GAT
ASG CYS A 12 12 T Turn -69.53 110.68 0.0 7GAT
ASG THR A 13 13 T Turn -67.01 -11.85 68.7 7GAT
ASG ASN A 14 14 T Turn -96.96 -32.36 42.4 7GAT
ASG CYS A 15 15 T Turn -139.15 13.39 9.8 7GAT
ASG PHE A 16 16 T Turn 57.37 1.57 154.3 7GAT
ASG THR A 17 17 C Coil -58.40 121.03 14.1 7GAT
ASG GLN A 18 18 C Coil -98.90 -1.30 148.9 7GAT
ASG THR A 19 19 C Coil -120.79 129.93 83.6 7GAT
ASG THR A 20 20 T Turn -166.18 149.76 22.6 7GAT
ASG PRO A 21 21 T Turn -65.81 -23.21 95.2 7GAT
ASG VAL A 22 22 T Turn -163.82 143.60 67.8 7GAT
ASG TRP A 23 23 T Turn -93.75 132.40 82.9 7GAT
ASG ARG A 24 24 E Strand -102.91 170.90 112.6 7GAT
ASG ARG A 25 25 E Strand -133.57 159.83 187.1 7GAT
ASG ASN A 26 26 E Strand -125.17 148.11 49.5 7GAT
ASG PRO A 27 27 T Turn -50.21 -1.07 133.2 7GAT
ASG GLU A 28 28 T Turn -99.36 -18.00 144.0 7GAT
ASG GLY A 29 29 T Turn 90.33 9.88 56.4 7GAT
ASG GLN A 30 30 E Strand -86.76 138.09 96.3 7GAT
ASG PRO A 31 31 E Strand -71.34 141.26 44.7 7GAT
ASG LEU A 32 32 E Strand -139.47 146.00 7.0 7GAT
ASG CYS A 33 33 C Coil -74.47 179.39 1.6 7GAT
ASG ASN A 34 34 H AlphaHelix -69.47 -40.24 33.9 7GAT
ASG ALA A 35 35 H AlphaHelix -64.25 -53.74 55.5 7GAT
ASG CYS A 36 36 H AlphaHelix -57.00 -42.53 14.6 7GAT
ASG GLY A 37 37 H AlphaHelix -60.46 -48.97 12.6 7GAT
ASG LEU A 38 38 H AlphaHelix -68.47 -49.04 79.1 7GAT
ASG PHE A 39 39 H AlphaHelix -69.90 -52.12 61.6 7GAT
ASG LEU A 40 40 H AlphaHelix -60.03 -48.46 60.2 7GAT
ASG LYS A 41 41 H AlphaHelix -61.65 -45.67 179.7 7GAT
ASG LEU A 42 42 H AlphaHelix -70.03 -39.98 135.8 7GAT
ASG HIS A 43 43 H AlphaHelix -84.26 -44.57 79.3 7GAT
ASG GLY A 44 44 C Coil 72.66 7.42 59.2 7GAT
ASG VAL A 45 45 C Coil -141.17 144.54 89.3 7GAT
ASG VAL A 46 46 C Coil -55.66 147.31 138.5 7GAT
ASG ARG A 47 47 C Coil -147.60 133.86 133.6 7GAT
ASG PRO A 48 48 C Coil -31.45 103.37 92.5 7GAT
ASG LEU A 49 49 G 310Helix -60.02 -12.91 102.0 7GAT
ASG SER A 50 50 G 310Helix -54.18 -8.29 114.4 7GAT
ASG LEU A 51 51 G 310Helix -75.44 -40.04 122.3 7GAT
ASG LYS A 52 52 C Coil -45.97 156.72 64.2 7GAT
ASG THR A 53 53 C Coil -147.61 163.26 78.9 7GAT
ASG ASP A 54 54 C Coil -92.18 0.62 138.7 7GAT
ASG VAL A 55 55 C Coil -117.44 135.18 108.4 7GAT
ASG ILE A 56 56 C Coil -110.45 130.02 73.5 7GAT
ASG LYS A 57 57 C Coil -79.98 130.03 153.2 7GAT
ASG LYS A 58 58 C Coil -84.66 123.21 178.2 7GAT
ASG ARG A 59 59 C Coil -94.26 175.65 191.8 7GAT
ASG ASN A 60 60 C Coil -76.71 -173.60 157.9 7GAT
ASG ARG A 61 61 C Coil -139.98 133.59 220.4 7GAT
ASG ASN A 62 62 C Coil -157.65 132.53 157.3 7GAT
ASG SER A 63 63 C Coil -60.25 139.98 76.3 7GAT
ASG ALA A 64 64 C Coil -60.07 -40.01 114.3 7GAT
ASG ASN A 65 65 C Coil -155.60 160.89 143.2 7GAT
ASG SER A 66 66 C Coil 54.23 360.00 156.1 7GAT