Документ взят из кэша поисковой машины. Адрес оригинального документа : http://mouse.belozersky.msu.ru/npidb/data/pdb_new/stride/2l3c.std.txt Дата изменения: Sat May 19 18:10:00 2012 Дата индексирования: Tue Oct 2 12:11:41 2012 Кодировка:

REM -------------------------------------------------------------------- 2L3C
REM 2L3C
REM STRIDE: Knowledge-based secondary structure assignment 2L3C
REM Please cite: D.Frishman & P.Argos, Proteins 23, 566-579, 1995 2L3C
REM 2L3C
REM Residue accessible surface area calculation 2L3C
REM Please cite: F.Eisenhaber & P.Argos, J.Comp.Chem. 14, 1272-1280, 1993 2L3C
REM F.Eisenhaber et al., J.Comp.Chem., 1994, submitted 2L3C
REM 2L3C
REM ------------------------ General information ----------------------- 2L3C
REM 2L3C
HDR HYDROLASE/RNA 12-SEP-10 2L3C 2L3C
CMP MOL_ID: 1; 2L3C
CMP MOLECULE: DOUBLE-STRANDED RNA-SPECIFIC EDITASE 1; 2L3C
CMP CHAIN: A; 2L3C
CMP FRAGMENT: UNP RESIDUES 74-147; 2L3C
CMP SYNONYM: DSRNA ADENOSINE DEAMINASE, RNA-EDITING DEAMINASE 1, 2L3C
CMP EDITING ENZYME 1; 2L3C
CMP EC: 3.5.-.-; 2L3C
CMP ENGINEERED: YES; 2L3C
CMP MOL_ID: 2; 2L3C
CMP MOLECULE: RNA (34-MER); 2L3C
CMP CHAIN: B; 2L3C
CMP ENGINEERED: YES 2L3C
SRC MOL_ID: 1; 2L3C
SRC ORGANISM_SCIENTIFIC: RATTUS NORVEGICUS; 2L3C
SRC ORGANISM_COMMON: BROWN RAT,RAT,RATS; 2L3C
SRC ORGANISM_TAXID: 10116; 2L3C
SRC GENE: ADARB1, RED1; 2L3C
SRC EXPRESSION_SYSTEM: ESCHERICHIA COLI; 2L3C
SRC EXPRESSION_SYSTEM_TAXID: 562; 2L3C
SRC EXPRESSION_SYSTEM_VECTOR: PET16; 2L3C
SRC MOL_ID: 2; 2L3C
SRC ORGANISM_SCIENTIFIC: RATTUS NORVEGICUS; 2L3C
SRC ORGANISM_COMMON: BROWN RAT,RAT,RATS; 2L3C
SRC ORGANISM_TAXID: 10116; 2L3C
SRC EXPRESSION_SYSTEM: ESCHERICHIA COLI; 2L3C
SRC EXPRESSION_SYSTEM_TAXID: 562 2L3C
AUT F.ALLAIN,R.STEFL,F.OBERSTRASS 2L3C
REM 2L3C
REM -------------------- Secondary structure summary ------------------- 2L3C
REM 2L3C
CHN /data/npidb/pdb/pdb_new/all/pdb2l3c.pdb A 2L3C
REM 2L3C
REM . . . . . 2L3C
SEQ 1 PGPVLPKNALMQLNEIKPGLQYMLLSQTGPVHAPLFVMSVEVNGQVFEGS 50 2L3C
STR TTTT HHHHHHHHHHHTTTTEEEEEEEE TTTTTEEEEEEEETTEEEEEE 2L3C
REM 2L3C
REM . . 2L3C
SEQ 51 GPTKKKAKLHAAEKALRSFVQFPN 74 2L3C
STR EETHHHHHHHHHHHHHHHHHTTT 2L3C
REM 2L3C
REM 2L3C
REM 2L3C
LOC AlphaHelix PRO 6 A ILE 16 A 2L3C
LOC AlphaHelix LYS 54 A VAL 70 A 2L3C
LOC Strand GLN 21 A THR 28 A 2L3C
LOC Strand LEU 35 A VAL 42 A 2L3C
LOC Strand GLN 45 A PRO 52 A 2L3C
LOC TurnIV PRO 1 A VAL 4 A 2L3C
LOC TurnIV LYS 17 A LEU 20 A 2L3C
LOC TurnIV PRO 30 A ALA 33 A 2L3C
LOC TurnIV VAL 31 A PRO 34 A 2L3C
LOC TurnIV GLU 41 A GLY 44 A 2L3C
LOC TurnI' VAL 42 A GLN 45 A 2L3C
LOC TurnIV GLY 51 A LYS 54 A 2L3C
LOC TurnIV VAL 70 A PRO 73 A 2L3C
REM 2L3C
REM --------------- Detailed secondary structure assignment------------- 2L3C
REM 2L3C
REM |---Residue---| |--Structure--| |-Phi-| |-Psi-| |-Area-| 2L3C
ASG PRO A 1 1 T Turn 360.00 175.88 186.7 2L3C
ASG GLY A 2 2 T Turn 177.96 -64.80 57.2 2L3C
ASG PRO A 3 3 T Turn -75.02 -2.39 126.2 2L3C
ASG VAL A 4 4 T Turn 45.85 -173.31 94.6 2L3C
ASG LEU A 5 5 C Coil -154.51 54.54 126.6 2L3C
ASG PRO A 6 6 H AlphaHelix -62.29 -21.20 36.9 2L3C
ASG LYS A 7 7 H AlphaHelix -49.33 -35.75 131.7 2L3C
ASG ASN A 8 8 H AlphaHelix -55.46 -54.83 92.5 2L3C
ASG ALA A 9 9 H AlphaHelix -55.37 -48.28 2.8 2L3C
ASG LEU A 10 10 H AlphaHelix -56.48 -60.14 53.9 2L3C
ASG MET A 11 11 H AlphaHelix -55.92 -43.95 104.0 2L3C
ASG GLN A 12 12 H AlphaHelix -55.82 -50.41 58.3 2L3C
ASG LEU A 13 13 H AlphaHelix -55.68 -48.35 7.2 2L3C
ASG ASN A 14 14 H AlphaHelix -55.25 -43.26 110.4 2L3C
ASG GLU A 15 15 H AlphaHelix -55.66 -61.89 138.8 2L3C
ASG ILE A 16 16 H AlphaHelix -61.12 -24.20 40.8 2L3C
ASG LYS A 17 17 T Turn -132.98 65.66 21.9 2L3C
ASG PRO A 18 18 T Turn -48.51 -9.16 116.0 2L3C
ASG GLY A 19 19 T Turn -167.93 125.13 56.9 2L3C
ASG LEU A 20 20 T Turn -163.62 -171.58 57.5 2L3C
ASG GLN A 21 21 E Strand -131.92 135.41 118.0 2L3C
ASG TYR A 22 22 E Strand -106.80 132.63 79.7 2L3C
ASG MET A 23 23 E Strand -135.11 146.14 72.7 2L3C
ASG LEU A 24 24 E Strand -104.54 135.85 66.0 2L3C
ASG LEU A 25 25 E Strand -116.30 -178.60 74.2 2L3C
ASG SER A 26 26 E Strand 32.37 -133.74 66.4 2L3C
ASG GLN A 27 27 E Strand 75.98 87.01 79.7 2L3C
ASG THR A 28 28 E Strand -166.13 167.82 93.1 2L3C
ASG GLY A 29 29 C Coil 169.87 -175.21 44.7 2L3C
ASG PRO A 30 30 T Turn -67.47 -54.96 98.0 2L3C
ASG VAL A 31 31 T Turn 177.41 -27.41 128.2 2L3C
ASG HIS A 32 32 T Turn -128.95 4.68 160.6 2L3C
ASG ALA A 33 33 T Turn -134.96 76.15 58.7 2L3C
ASG PRO A 34 34 T Turn -78.90 135.47 36.6 2L3C
ASG LEU A 35 35 E Strand -105.15 118.06 67.1 2L3C
ASG PHE A 36 36 E Strand -109.31 135.52 21.0 2L3C
ASG VAL A 37 37 E Strand -130.52 104.91 10.4 2L3C
ASG MET A 38 38 E Strand -101.89 135.20 27.5 2L3C
ASG SER A 39 39 E Strand -123.86 135.38 4.2 2L3C
ASG VAL A 40 40 E Strand -105.12 135.14 0.3 2L3C
ASG GLU A 41 41 E Strand -109.57 117.58 66.1 2L3C
ASG VAL A 42 42 E Strand -135.50 128.44 3.3 2L3C
ASG ASN A 43 43 T Turn 51.29 20.13 76.1 2L3C
ASG GLY A 44 44 T Turn 94.19 1.61 67.0 2L3C
ASG GLN A 45 45 E Strand -104.43 134.98 60.5 2L3C
ASG VAL A 46 46 E Strand -125.92 128.09 69.8 2L3C
ASG PHE A 47 47 E Strand -124.90 135.19 61.0 2L3C
ASG GLU A 48 48 E Strand -115.98 135.95 95.1 2L3C
ASG GLY A 49 49 E Strand -133.46 135.07 0.6 2L3C
ASG SER A 50 50 E Strand -106.33 123.56 67.0 2L3C
ASG GLY A 51 51 E Strand -136.02 154.74 0.6 2L3C
ASG PRO A 52 52 E Strand -74.98 135.56 75.0 2L3C
ASG THR A 53 53 T Turn 62.75 174.97 73.8 2L3C
ASG LYS A 54 54 H AlphaHelix -73.98 -22.78 135.3 2L3C
ASG LYS A 55 55 H AlphaHelix -55.68 -78.74 136.3 2L3C
ASG LYS A 56 56 H AlphaHelix -55.49 -32.55 115.7 2L3C
ASG ALA A 57 57 H AlphaHelix -55.12 -67.68 0.0 2L3C
ASG LYS A 58 58 H AlphaHelix -55.94 -38.27 73.0 2L3C
ASG LEU A 59 59 H AlphaHelix -55.52 -61.68 23.5 2L3C
ASG HIS A 60 60 H AlphaHelix -55.62 -41.53 76.6 2L3C
ASG ALA A 61 61 H AlphaHelix -55.76 -45.26 0.0 2L3C
ASG ALA A 62 62 H AlphaHelix -55.39 -49.08 0.2 2L3C
ASG GLU A 63 63 H AlphaHelix -55.25 -52.93 55.5 2L3C
ASG LYS A 64 64 H AlphaHelix -55.62 -60.36 80.3 2L3C
ASG ALA A 65 65 H AlphaHelix -55.34 -38.05 1.0 2L3C
ASG LEU A 66 66 H AlphaHelix -54.99 -67.99 20.6 2L3C
ASG ARG A 67 67 H AlphaHelix -55.61 -38.12 140.9 2L3C
ASG SER A 68 68 H AlphaHelix -62.77 -85.19 26.3 2L3C
ASG PHE A 69 69 H AlphaHelix -61.36 -15.70 1.8 2L3C
ASG VAL A 70 70 H AlphaHelix -55.39 -15.65 67.8 2L3C
ASG GLN A 71 71 T Turn -82.09 -12.85 134.4 2L3C
ASG PHE A 72 72 T Turn -150.10 64.60 117.8 2L3C
ASG PRO A 73 73 T Turn -73.70 0.09 79.4 2L3C
ASG ASN A 74 74 C Coil -147.98 360.00 195.5 2L3C