Документ взят из кэша поисковой машины. Адрес оригинального документа : http://mouse.belozersky.msu.ru/npidb/data/pdb_new/stride/1ig4.std.txt Дата изменения: Fri May 18 13:48:09 2012 Дата индексирования: Tue Oct 2 11:49:14 2012 Кодировка:

REM -------------------------------------------------------------------- 1IG4
REM 1IG4
REM STRIDE: Knowledge-based secondary structure assignment 1IG4
REM Please cite: D.Frishman & P.Argos, Proteins 23, 566-579, 1995 1IG4
REM 1IG4
REM Residue accessible surface area calculation 1IG4
REM Please cite: F.Eisenhaber & P.Argos, J.Comp.Chem. 14, 1272-1280, 1993 1IG4
REM F.Eisenhaber et al., J.Comp.Chem., 1994, submitted 1IG4
REM 1IG4
REM ------------------------ General information ----------------------- 1IG4
REM 1IG4
HDR TRANSCRIPTION/DNA 17-APR-01 1IG4 1IG4
CMP MOL_ID: 1; 1IG4
CMP MOLECULE: METHYL-CPG BINDING PROTEIN; 1IG4
CMP CHAIN: A; 1IG4
CMP FRAGMENT: METHYL-CPG-BINDING DOMAIN; 1IG4
CMP ENGINEERED: YES; 1IG4
CMP MOL_ID: 2; 1IG4
CMP MOLECULE: 5'-D(*GP*TP*AP*TP*CP*(5CM)P*GP*GP*AP*TP*AP*C)-3'; 1IG4
CMP CHAIN: B, C; 1IG4
CMP ENGINEERED: YES 1IG4
SRC MOL_ID: 1; 1IG4
SRC ORGANISM_SCIENTIFIC: HOMO SAPIENS; 1IG4
SRC ORGANISM_COMMON: HUMAN; 1IG4
SRC ORGANISM_TAXID: 9606; 1IG4
SRC GENE: MBD1; 1IG4
SRC EXPRESSION_SYSTEM: ESCHERICHIA COLI; 1IG4
SRC EXPRESSION_SYSTEM_TAXID: 562; 1IG4
SRC EXPRESSION_SYSTEM_STRAIN: DH5A; 1IG4
SRC EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; 1IG4
SRC EXPRESSION_SYSTEM_PLASMID: PGEX-2T; 1IG4
SRC MOL_ID: 2; 1IG4
SRC SYNTHETIC: YES 1IG4
AUT I.OHKI,N.SHIMOTAKE,N.FUJITA,J.-G.JEE,T.IKEGAMI,M.NAKAO, 1IG4
AUT M.SHIRAKAWA 1IG4
REM 1IG4
REM -------------------- Secondary structure summary ------------------- 1IG4
REM 1IG4
CHN /data/npidb/pdb/pdb_new/all/pdb1ig4.pdb A 1IG4
REM 1IG4
REM . . . . . 1IG4
SEQ 1 MAEDWLDCPALGPGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELT 50 1IG4
STR TTTEEETTTTTTTTEEEEE TTTTTTT EEEEETTTT EE HHHHH 1IG4
REM 1IG4
REM . . 1IG4
SEQ 51 RYLGPACDLTLFDFKQGILCYPAPK 75 1IG4
STR HHHTTTTTTTTEETTTTEETTT 1IG4
REM 1IG4
REM 1IG4
REM 1IG4
LOC AlphaHelix LYS 46 A LEU 53 A 1IG4
LOC Strand TRP 5 A ASP 7 A 1IG4
LOC Strand LYS 16 A VAL 20 A 1IG4
LOC Strand ASP 32 A GLN 36 A 1IG4
LOC Strand ARG 42 A ILE 43 A 1IG4
LOC Strand PHE 62 A ASP 63 A 1IG4
LOC Strand ILE 68 A LEU 69 A 1IG4
LOC TurnIV ALA 2 A TRP 5 A 1IG4
LOC TurnI CYS 8 A LEU 11 A 1IG4
LOC TurnIV PRO 9 A GLY 12 A 1IG4
LOC TurnII GLY 12 A TRP 15 A 1IG4
LOC TurnIV SER 24 A THR 27 A 1IG4
LOC TurnIV GLY 25 A CYS 28 A 1IG4
LOC TurnII THR 27 A ARG 30 A 1IG4
LOC TurnIV SER 37 A GLY 40 A 1IG4
LOC TurnI GLY 54 A CYS 57 A 1IG4
LOC TurnIV PRO 55 A ASP 58 A 1IG4
LOC TurnI LEU 59 A PHE 62 A 1IG4
LOC TurnI ASP 63 A GLN 66 A 1IG4
LOC TurnIV PHE 64 A GLY 67 A 1IG4
LOC TurnVIII LEU 69 A PRO 72 A 1IG4
REM 1IG4
REM --------------- Detailed secondary structure assignment------------- 1IG4
REM 1IG4
REM |---Residue---| |--Structure--| |-Phi-| |-Psi-| |-Area-| 1IG4
ASG MET A 1 1 C Coil 360.00 -166.59 219.6 1IG4
ASG ALA A 2 2 T Turn 52.68 80.06 80.2 1IG4
ASG GLU A 3 3 T Turn -71.50 -61.88 135.0 1IG4
ASG ASP A 4 4 T Turn -169.39 92.10 94.6 1IG4
ASG TRP A 5 5 E Strand -94.38 113.03 74.5 1IG4
ASG LEU A 6 6 E Strand -111.42 154.20 68.2 1IG4
ASG ASP A 7 7 E Strand -58.07 170.54 122.2 1IG4
ASG CYS A 8 8 T Turn -150.15 87.75 3.4 1IG4
ASG PRO A 9 9 T Turn -71.14 -5.26 91.0 1IG4
ASG ALA A 10 10 T Turn -58.82 -14.78 0.6 1IG4
ASG LEU A 11 11 T Turn -127.32 -68.95 45.0 1IG4
ASG GLY A 12 12 T Turn -174.96 -166.22 26.5 1IG4
ASG PRO A 13 13 T Turn -73.78 138.69 127.3 1IG4
ASG GLY A 14 14 T Turn 109.25 -35.09 46.8 1IG4
ASG TRP A 15 15 T Turn -62.40 145.92 6.5 1IG4
ASG LYS A 16 16 E Strand -139.53 132.53 69.4 1IG4
ASG ARG A 17 17 E Strand -115.21 152.94 32.3 1IG4
ASG ARG A 18 18 E Strand -140.03 160.15 58.3 1IG4
ASG GLU A 19 19 E Strand -113.96 143.14 99.5 1IG4
ASG VAL A 20 20 E Strand -132.34 101.55 36.8 1IG4
ASG PHE A 21 21 C Coil -84.70 50.04 149.3 1IG4
ASG ARG A 22 22 C Coil 48.59 -179.90 77.7 1IG4
ASG LYS A 23 23 C Coil -139.17 -38.40 179.4 1IG4
ASG SER A 24 24 T Turn 167.70 -166.06 74.7 1IG4
ASG GLY A 25 25 T Turn 99.57 -91.10 82.9 1IG4
ASG ALA A 26 26 T Turn -147.81 -41.92 95.9 1IG4
ASG THR A 27 27 T Turn -77.80 -0.16 46.0 1IG4
ASG CYS A 28 28 T Turn -45.06 138.78 69.4 1IG4
ASG GLY A 29 29 T Turn 104.72 -14.08 45.9 1IG4
ASG ARG A 30 30 T Turn -87.41 150.00 152.4 1IG4
ASG SER A 31 31 C Coil -110.97 118.06 34.4 1IG4
ASG ASP A 32 32 E Strand -116.16 127.92 41.3 1IG4
ASG THR A 33 33 E Strand -99.77 124.30 2.2 1IG4
ASG TYR A 34 34 E Strand -113.49 142.64 63.7 1IG4
ASG TYR A 35 35 E Strand -139.74 139.85 1.5 1IG4
ASG GLN A 36 36 E Strand -99.62 152.43 75.2 1IG4
ASG SER A 37 37 T Turn -54.15 -177.87 0.2 1IG4
ASG PRO A 38 38 T Turn -86.05 -9.22 41.5 1IG4
ASG THR A 39 39 T Turn -161.09 14.90 122.1 1IG4
ASG GLY A 40 40 T Turn 146.49 80.98 36.2 1IG4
ASG ASP A 41 41 C Coil 172.74 128.79 53.5 1IG4
ASG ARG A 42 42 E Strand -97.85 105.37 125.6 1IG4
ASG ILE A 43 43 E Strand -106.21 135.55 0.9 1IG4
ASG ARG A 44 44 C Coil -111.46 -3.34 139.8 1IG4
ASG SER A 45 45 C Coil -154.97 -165.19 37.1 1IG4
ASG LYS A 46 46 H AlphaHelix -78.95 -42.80 65.3 1IG4
ASG VAL A 47 47 H AlphaHelix -56.58 -54.78 83.0 1IG4
ASG GLU A 48 48 H AlphaHelix -50.57 -39.02 66.7 1IG4
ASG LEU A 49 49 H AlphaHelix -67.98 -42.71 0.0 1IG4
ASG THR A 50 50 H AlphaHelix -65.79 -15.77 22.3 1IG4
ASG ARG A 51 51 H AlphaHelix -77.77 -62.37 180.2 1IG4
ASG TYR A 52 52 H AlphaHelix -58.44 -21.93 107.1 1IG4
ASG LEU A 53 53 H AlphaHelix -94.56 -15.84 55.9 1IG4
ASG GLY A 54 54 T Turn 107.49 153.35 19.2 1IG4
ASG PRO A 55 55 T Turn -70.32 -29.70 118.5 1IG4
ASG ALA A 56 56 T Turn -75.23 -21.61 98.9 1IG4
ASG CYS A 57 57 T Turn -89.57 66.33 69.2 1IG4
ASG ASP A 58 58 T Turn -59.49 166.25 105.2 1IG4
ASG LEU A 59 59 T Turn -139.48 64.60 24.2 1IG4
ASG THR A 60 60 T Turn -73.47 -20.99 118.8 1IG4
ASG LEU A 61 61 T Turn -95.10 13.50 75.8 1IG4
ASG PHE A 62 62 E Strand -98.45 130.10 9.6 1IG4
ASG ASP A 63 63 E Strand -88.19 120.33 61.8 1IG4
ASG PHE A 64 64 T Turn -72.75 -26.27 74.3 1IG4
ASG LYS A 65 65 T Turn -90.13 -12.07 112.6 1IG4
ASG GLN A 66 66 T Turn -123.07 -40.51 97.0 1IG4
ASG GLY A 67 67 T Turn 82.50 56.59 0.2 1IG4
ASG ILE A 68 68 E Strand -154.62 150.55 53.1 1IG4
ASG LEU A 69 69 E Strand -93.30 83.43 65.7 1IG4
ASG CYS A 70 70 T Turn -43.13 -45.43 106.6 1IG4
ASG TYR A 71 71 T Turn -125.15 131.16 140.3 1IG4
ASG PRO A 72 72 T Turn -73.33 -83.79 104.0 1IG4
ASG ALA A 73 73 C Coil -139.00 154.42 58.5 1IG4
ASG PRO A 74 74 C Coil -73.22 -78.64 123.4 1IG4
ASG LYS A 75 75 C Coil -131.76 360.00 263.5 1IG4