Документ взят из кэша поисковой машины. Адрес оригинального документа : http://mouse.belozersky.msu.ru/npidb/data/pdb_new/stride/1dk1.std.txt Дата изменения: Tue Oct 2 00:09:01 2012 Дата индексирования: Tue Oct 2 11:46:06 2012 Кодировка:

REM -------------------------------------------------------------------- 1DK1
REM 1DK1
REM STRIDE: Knowledge-based secondary structure assignment 1DK1
REM Please cite: D.Frishman & P.Argos, Proteins 23, 566-579, 1995 1DK1
REM 1DK1
REM Residue accessible surface area calculation 1DK1
REM Please cite: F.Eisenhaber & P.Argos, J.Comp.Chem. 14, 1272-1280, 1993 1DK1
REM F.Eisenhaber et al., J.Comp.Chem., 1994, submitted 1DK1
REM 1DK1
REM ------------------------ General information ----------------------- 1DK1
REM 1DK1
HDR RIBOSOME 06-DEC-99 1DK1 1DK1
CMP MOL_ID: 1; 1DK1
CMP MOLECULE: RRNA FRAGMENT; 1DK1
CMP CHAIN: B; 1DK1
CMP ENGINEERED: YES; 1DK1
CMP MOL_ID: 2; 1DK1
CMP MOLECULE: 30S RIBOSOMAL PROTEIN S15; 1DK1
CMP CHAIN: A; 1DK1
CMP FRAGMENT: RESIDUES 2-87; 1DK1
CMP ENGINEERED: YES; 1DK1
CMP MUTATION: YES 1DK1
SRC MOL_ID: 1; 1DK1
SRC ORGANISM_SCIENTIFIC: THERMUS THERMOPHILUS; 1DK1
SRC ORGANISM_TAXID: 274; 1DK1
SRC EXPRESSION_SYSTEM: ESCHERICHIA COLI; 1DK1
SRC EXPRESSION_SYSTEM_TAXID: 562; 1DK1
SRC MOL_ID: 2; 1DK1
SRC ORGANISM_SCIENTIFIC: THERMUS THERMOPHILUS; 1DK1
SRC ORGANISM_TAXID: 274; 1DK1
SRC EXPRESSION_SYSTEM: ESCHERICHIA COLI; 1DK1
SRC EXPRESSION_SYSTEM_TAXID: 562 1DK1
AUT A.NIKULIN,A.SERGANOV,E.ENNIFAR,S.TISCHENKO,N.NEVSKAYA 1DK1
REM 1DK1
REM -------------------- Secondary structure summary ------------------- 1DK1
REM 1DK1
CHN /data/npidb/pdb/pdb_new/all/pdb1dk1.pdb A 1DK1
REM 1DK1
REM . . . . . 1DK1
SEQ 1 PITKEEKQKVQEFARFPGDTGSTEVQVALLTLRINRLSEHLKVHKKDHHS 50 1DK1
STR TTTHHHHH GGG TTTTTTTTTTHHHHHHHHHHHHHHHHHHHHTTTTTHH 1DK1
REM 1DK1
REM . . . 1DK1
SEQ 51 HRGLLVGQRRRLLRYLQREDPERYRLIEKLGI 82 1DK1
STR HHHHHHHHHHHHHHHHHHH HHHHGGGTTTT 1DK1
REM 1DK1
REM 1DK1
REM 1DK1
LOC AlphaHelix LYS 104 A GLN 108 A 1DK1
LOC AlphaHelix GLU 125 A VAL 144 A 1DK1
LOC AlphaHelix HIS 150 A GLU 172 A 1DK1
LOC AlphaHelix PRO 174 A TYR 177 A 1DK1
LOC 310Helix VAL 110 A GLU 113 A 1DK1
LOC 310Helix ARG 178 A ILE 181 A 1DK1
LOC TurnIV ALA 115 A PRO 118 A 1DK1
LOC TurnIV PHE 117 A ASP 120 A 1DK1
LOC TurnIV ASP 120 A SER 123 A 1DK1
LOC TurnI HIS 145 A ASP 148 A 1DK1
LOC TurnIV ILE 181 A LEU 184 A 1DK1
LOC TurnIV GLU 182 A GLY 185 A 1DK1
LOC GammaClassic PRO 101 A THR 103 A 1DK1
LOC GammaClassic SER 123 A GLU 125 A 1DK1
LOC GammaClassic ASP 148 A HIS 150 A 1DK1
REM 1DK1
REM --------------- Detailed secondary structure assignment------------- 1DK1
REM 1DK1
REM |---Residue---| |--Structure--| |-Phi-| |-Psi-| |-Area-| 1DK1
ASG PRO A 101 1 T Turn 360.00 -50.50 150.6 1DK1
ASG ILE A 102 2 T Turn 76.52 -71.77 29.4 1DK1
ASG THR A 103 3 T Turn 76.53 166.49 84.0 1DK1
ASG LYS A 104 4 H AlphaHelix -59.36 -41.18 150.7 1DK1
ASG GLU A 105 5 H AlphaHelix -65.31 22.85 143.7 1DK1
ASG GLU A 106 6 H AlphaHelix -149.71 -68.68 66.1 1DK1
ASG LYS A 107 7 H AlphaHelix -57.43 -37.19 119.8 1DK1
ASG GLN A 108 8 H AlphaHelix -76.89 -35.92 108.5 1DK1
ASG LYS A 109 9 C Coil -57.81 -42.77 113.8 1DK1
ASG VAL A 110 10 G 310Helix -66.96 360.00 24.4 1DK1
ASG GLN A 112 11 G 310Helix 360.00 -8.87 153.8 1DK1
ASG GLU A 113 12 G 310Helix -100.58 -41.54 108.5 1DK1
ASG PHE A 114 13 C Coil -92.81 -10.63 20.7 1DK1
ASG ALA A 115 14 T Turn -52.85 141.37 31.1 1DK1
ASG ARG A 116 15 T Turn -85.87 -7.04 133.2 1DK1
ASG PHE A 117 16 T Turn -177.23 151.34 113.4 1DK1
ASG PRO A 118 17 T Turn -46.34 60.19 141.2 1DK1
ASG GLY A 119 18 T Turn 160.63 -4.95 53.7 1DK1
ASG ASP A 120 19 T Turn -64.09 128.75 19.0 1DK1
ASG THR A 121 20 T Turn -141.06 -2.05 116.3 1DK1
ASG GLY A 122 21 T Turn -147.09 28.50 45.1 1DK1
ASG SER A 123 22 T Turn -79.37 30.00 10.4 1DK1
ASG THR A 124 23 T Turn 75.66 -60.15 20.8 1DK1
ASG GLU A 125 24 H AlphaHelix -62.47 -62.82 14.6 1DK1
ASG VAL A 126 25 H AlphaHelix -49.50 -44.58 10.6 1DK1
ASG GLN A 127 26 H AlphaHelix -58.05 -41.00 76.7 1DK1
ASG VAL A 128 27 H AlphaHelix -73.60 -49.86 2.6 1DK1
ASG ALA A 129 28 H AlphaHelix -49.74 -71.55 4.5 1DK1
ASG LEU A 130 29 H AlphaHelix -58.69 -10.20 50.1 1DK1
ASG LEU A 131 30 H AlphaHelix -80.41 -37.10 32.4 1DK1
ASG THR A 132 31 H AlphaHelix -76.34 -15.35 12.0 1DK1
ASG LEU A 133 32 H AlphaHelix -75.58 -40.46 32.1 1DK1
ASG ARG A 134 33 H AlphaHelix -89.61 -8.65 151.3 1DK1
ASG ILE A 135 34 H AlphaHelix -72.40 -40.78 19.6 1DK1
ASG ASN A 136 35 H AlphaHelix -73.93 -57.24 80.6 1DK1
ASG ARG A 137 36 H AlphaHelix -41.89 -17.07 103.6 1DK1
ASG LEU A 138 37 H AlphaHelix -117.00 -19.01 39.9 1DK1
ASG SER A 139 38 H AlphaHelix -65.86 -47.06 65.9 1DK1
ASG GLU A 140 39 H AlphaHelix -56.61 -45.12 133.1 1DK1
ASG HIS A 141 40 H AlphaHelix -52.21 -66.36 58.4 1DK1
ASG LEU A 142 41 H AlphaHelix -37.05 -32.69 26.9 1DK1
ASG LYS A 143 42 H AlphaHelix -61.11 -64.27 135.9 1DK1
ASG VAL A 144 43 H AlphaHelix -51.80 -33.50 119.3 1DK1
ASG HIS A 145 44 T Turn -119.67 77.62 83.0 1DK1
ASG LYS A 146 45 T Turn -71.56 -7.45 159.7 1DK1
ASG LYS A 147 46 T Turn -94.96 -6.13 191.0 1DK1
ASG ASP A 148 47 T Turn -54.82 -57.25 55.2 1DK1
ASG HIS A 149 48 T Turn 60.35 -71.29 115.8 1DK1
ASG HIS A 150 49 H AlphaHelix -40.08 -47.07 120.8 1DK1
ASG SER A 151 50 H AlphaHelix -65.43 -21.67 44.9 1DK1
ASG HIS A 152 51 H AlphaHelix -65.77 -29.27 85.2 1DK1
ASG ARG A 153 52 H AlphaHelix -47.92 -50.67 149.5 1DK1
ASG GLY A 154 53 H AlphaHelix -70.83 -32.42 54.9 1DK1
ASG LEU A 155 54 H AlphaHelix -55.03 -40.35 23.2 1DK1
ASG LEU A 156 55 H AlphaHelix -70.65 360.00 109.8 1DK1
ASG VAL A 159 56 H AlphaHelix 360.00 -43.76 63.9 1DK1
ASG GLY A 160 57 H AlphaHelix -64.25 -48.75 31.4 1DK1
ASG GLN A 161 58 H AlphaHelix -53.38 -47.69 76.9 1DK1
ASG ARG A 162 59 H AlphaHelix -59.13 -39.30 46.3 1DK1
ASG ARG A 163 60 H AlphaHelix -74.77 -28.52 105.7 1DK1
ASG ARG A 164 61 H AlphaHelix -73.70 -34.89 153.2 1DK1
ASG LEU A 165 62 H AlphaHelix -67.88 -51.41 21.2 1DK1
ASG LEU A 166 63 H AlphaHelix -52.57 -45.78 4.0 1DK1
ASG ARG A 167 64 H AlphaHelix -62.27 -37.56 144.8 1DK1
ASG TYR A 168 65 H AlphaHelix -61.71 -53.02 104.8 1DK1
ASG LEU A 169 66 H AlphaHelix -67.55 -8.25 1.2 1DK1
ASG GLN A 170 67 H AlphaHelix -87.27 -26.05 88.1 1DK1
ASG ARG A 171 68 H AlphaHelix -85.45 -53.75 133.0 1DK1
ASG GLU A 172 69 H AlphaHelix -71.79 -29.17 119.3 1DK1
ASG ASP A 173 70 C Coil -151.95 71.88 29.5 1DK1
ASG PRO A 174 71 H AlphaHelix -42.72 -55.51 64.8 1DK1
ASG GLU A 175 72 H AlphaHelix -41.97 -62.58 130.8 1DK1
ASG ARG A 176 73 H AlphaHelix -56.50 -25.00 70.6 1DK1
ASG TYR A 177 74 H AlphaHelix -67.76 -45.11 25.5 1DK1
ASG ARG A 178 75 G 310Helix -65.66 360.00 153.3 1DK1
ASG LEU A 180 76 G 310Helix 360.00 -47.59 24.7 1DK1
ASG ILE A 181 77 G 310Helix -58.57 0.27 33.9 1DK1
ASG GLU A 182 78 T Turn -106.66 -178.66 135.2 1DK1
ASG LYS A 183 79 T Turn 60.36 4.47 115.2 1DK1
ASG LEU A 184 80 T Turn -155.36 -47.77 74.7 1DK1
ASG GLY A 185 81 T Turn 78.21 120.97 54.5 1DK1
ASG ILE A 186 82 C Coil -96.96 360.00 126.8 1DK1