Документ взят из кэша поисковой машины. Адрес оригинального документа : http://mouse.belozersky.msu.ru/npidb/data/pdb_new/x3dna/3iwn.pdb2.pdb.txt Дата изменения: Fri Mar 22 14:30:47 2013 Дата индексирования: Fri Feb 28 19:39:16 2014 Кодировка:

/pdb/3iwn.pdb2.pdb
3iwn.pdb2.out
2 # duplex
32 # number of base-pairs
1 0 # explicit bp numbering/hetero atoms
1 92 0 # 1 | ...1>B:.101_:[..C]C-----G[..G]:.192_:B<...1 2.23 0.24 28.04 8.91 2.11
2 91 0 # 2 | ...1>B:.102_:[..A]A-----U[..U]:.191_:B<...1 1.92 0.10 9.63 8.56 0.60
3 89 0 # 3 | ...1>B:.103_:[..C]C-----G[..G]:.189_:B<...1 1.48 1.08 22.75 8.93 -0.23
4 88 9 # 4 x ...1>B:.104_:[..G]G-----C[..C]:.188_:B<...1 1.18 0.44 29.85 8.81 -1.45
9 37 1 # 5 + ...1>B:.109_:[..G]G-*---A[..A]:.137_:B<...1 2.93 0.33 12.94 11.29 3.24
11 36 0 # 6 | ...1>B:.111_:[..G]G-----C[..C]:.136_:B<...1 1.53 1.39 15.28 8.92 0.07
12 35 0 # 7 | ...1>B:.112_:[..C]C-----G[..G]:.135_:B<...1 0.70 0.22 15.38 8.80 -3.08
78 34 9 # 8 x ...1>B:.178_:[..G]G-*---C[..C]:.134_:B<...1 2.86 0.02 26.71 9.59 3.24
15 32 0 # 9 | ...1>B:.115_:[..A]A-*---G[..G]:.132_:B<...1 8.88 1.15 19.99 8.85 12.18
16 31 0 # 10 | ...1>B:.116_:[..C]C-----G[..G]:.131_:B<...1 1.34 1.02 15.92 8.72 -0.81
17 30 0 # 11 | ...1>B:.117_:[..C]C-----G[..G]:.130_:B<...1 1.18 1.18 31.30 9.08 0.10
18 29 0 # 12 | ...1>B:.118_:[..A]A-----U[..U]:.129_:B<...1 0.12 0.07 19.83 8.76 -3.74
19 28 0 # 13 | ...1>B:.119_:[..U]U-*---G[..G]:.128_:B<...1 1.15 0.86 16.72 9.16 2.71
20 27 0 # 14 | ...1>B:.120_:[..U]U-----A[..A]:.127_:B<...1 0.89 0.87 12.75 9.00 -1.73
21 26 0 # 15 | ...1>B:.121_:[..C]C-----G[..G]:.126_:B<...1 0.79 0.50 2.96 9.18 -3.07
22 24 9 # 16 x ...1>B:.122_:[..G]G-*---A[..A]:.124_:B<...1 10.54 0.95 31.99 6.16 11.03
38 85 0 # 17 | ...1>B:.138_:[..A]A-*---U[..U]:.185_:B<...1 4.87 1.99 3.78 7.53 6.03
40 84 0 # 18 | ...1>B:.140_:[..G]G-*---U[..U]:.184_:B<...1 2.77 0.67 16.37 8.85 1.93
41 83 0 # 19 | ...1>B:.141_:[..C]C-----G[..G]:.183_:B<...1 0.25 0.13 19.22 8.99 -3.54
42 82 0 # 20 | ...1>B:.142_:[..C]C-----G[..G]:.182_:B<...1 0.25 0.09 25.66 8.90 -3.28
44 81 0 # 21 | ...1>B:.144_:[..C]C-----G[..G]:.181_:B<...1 0.43 0.34 25.33 9.00 -2.61
45 80 0 # 22 | ...1>B:.145_:[..C]C-----G[..G]:.180_:B<...1 1.35 1.21 2.92 8.47 -1.08
46 79 0 # 23 | ...1>B:.146_:[..G]G-*---C[..C]:.179_:B<...1 3.98 0.79 18.33 8.56 6.49
47 76 0 # 24 | ...1>B:.147_:[..G]G-*---U[..U]:.176_:B<...1 2.65 1.20 8.20 9.10 4.45
48 75 0 # 25 | ...1>B:.148_:[..C]C-----G[..G]:.175_:B<...1 1.80 1.34 26.69 9.14 0.80
49 74 0 # 26 | ...1>B:.149_:[..C]C-----G[..G]:.174_:B<...1 0.66 0.58 8.73 8.75 -2.75
50 73 0 # 27 | ...1>B:.150_:[..U]U-----A[..A]:.173_:B<...1 1.32 1.07 21.32 8.66 -0.48
51 72 0 # 28 | ...1>B:.151_:[..A]A-----U[..U]:.172_:B<...1 1.63 0.03 36.14 8.62 1.51
54 71 0 # 29 | ...1>B:.154_:[..C]C-----G[..G]:.171_:B<...1 1.10 0.98 46.91 8.52 0.42
55 70 0 # 30 | ...1>B:.155_:[..G]G-----C[..C]:.170_:B<...1 0.65 0.62 17.84 8.81 -2.23
56 69 0 # 31 | ...1>B:.156_:[..G]G-----C[..C]:.169_:B<...1 1.31 1.30 35.21 8.79 0.68
57 68 0 # 32 | ...1>B:.157_:[..C]C-----G[..G]:.168_:B<...1 0.79 0.72 24.44 8.55 -1.55
##### Base-pair criteria used: 4.00 0.00 15.00 2.50 65.00 4.50 7.50 [ O N]
##### 9 non-Watson-Crick base-pairs, and 5 helices (1 isolated bp)
##### Helix #1 (4): 1 - 4 ***broken O3'[i] to P[i+1] linkage***
##### Helix #2 (1): 5
##### Helix #3 (3): 6 - 8 ***broken O3'[i] to P[i+1] linkage***
##### Helix #4 (8): 9 - 16 ***broken O3'[i] to P[i+1] linkage***
##### Helix #5 (16): 17 - 32 ***broken O3'[i] to P[i+1] linkage***