Документ взят из кэша поисковой машины. Адрес оригинального документа : http://mouse.belozersky.msu.ru/npidb/data/pdb_new/x3dna/2vih.pdb1.pdb.txt Дата изменения: Fri Mar 22 14:14:03 2013 Дата индексирования: Fri Feb 28 17:30:07 2014 Кодировка:

/pdb/2vih.pdb1.pdb
2vih.pdb1.out
2 # duplex
18 # number of base-pairs
1 0 # explicit bp numbering/hetero atoms
284 305 0 # 1 | ...1>C:..20_:[.DC]C-----G[.DG]:..41_:C<...1 0.40 0.19 16.54 8.69 -3.40
285 304 0 # 2 | ...1>C:..21_:[.DC]C-----G[.DG]:..40_:C<...1 0.85 0.51 11.42 8.61 -2.55
286 303 0 # 3 | ...1>C:..22_:[.DC]C-----G[.DG]:..39_:C<...1 0.72 0.09 13.24 8.64 -3.43
287 302 0 # 4 | ...1>C:..23_:[.DC]C-----G[.DG]:..38_:C<...1 0.28 0.04 10.01 8.73 -4.14
288 300 0 # 5 | ...1>C:..24_:[.DT]T-----A[.DA]:..36_:C<...1 0.22 0.14 6.13 8.73 -4.20
289 299 0 # 6 | ...1>C:..25_:[.DA]A-----T[.DT]:..35_:C<...1 0.15 0.01 14.86 8.93 -4.08
290 298 0 # 7 | ...1>C:..26_:[.DG]G-----C[.DC]:..34_:C<...1 0.37 0.13 13.12 8.79 -3.72
291 297 0 # 8 | ...1>C:..27_:[.DC]C-----G[.DG]:..33_:C<...1 0.18 0.15 4.93 8.91 -4.26
292 296 9 # 9 x ...1>C:..28_:[.DT]T-**+-A[.DA]:..32_:C<...1 3.78 0.68 25.27 6.66 3.40
310 331 0 # 10 | ...1>D:..20_:[.DC]C-----G[.DG]:..41_:D<...1 0.29 0.04 12.11 8.81 -4.04
311 330 0 # 11 | ...1>D:..21_:[.DC]C-----G[.DG]:..40_:D<...1 0.70 0.46 9.34 8.57 -2.91
312 329 0 # 12 | ...1>D:..22_:[.DC]C-----G[.DG]:..39_:D<...1 1.10 0.83 8.26 8.61 -1.82
313 328 0 # 13 | ...1>D:..23_:[.DC]C-----G[.DG]:..38_:D<...1 0.41 0.29 8.49 8.78 -3.58
314 326 0 # 14 | ...1>D:..24_:[.DT]T-----A[.DA]:..36_:D<...1 0.33 0.24 6.69 8.86 -3.84
315 325 0 # 15 | ...1>D:..25_:[.DA]A-----T[.DT]:..35_:D<...1 0.42 0.12 16.15 8.45 -1.53
316 324 0 # 16 | ...1>D:..26_:[.DG]G-----C[.DC]:..34_:D<...1 0.43 0.15 10.84 8.79 -3.73
317 323 0 # 17 | ...1>D:..27_:[.DC]C-----G[.DG]:..33_:D<...1 0.11 0.03 5.28 9.12 -4.56
318 322 0 # 18 | ...1>D:..28_:[.DT]T-**+-A[.DA]:..32_:D<...1 3.73 0.48 25.57 6.72 2.97
##### Base-pair criteria used: 4.00 0.00 15.00 2.50 65.00 4.50 7.50 [ O N]
##### 2 non-Watson-Crick base-pairs, and 2 helices (0 isolated bps)
##### Helix #1 (9): 1 - 9 ***broken O3'[i] to P[i+1] linkage***
##### Helix #2 (9): 10 - 18 ***broken O3'[i] to P[i+1] linkage***