Classification:
| Class: | All alpha proteins |
| Fold: | DNA-glycosylase |
| Superfamily: | DNA-glycosylase |
| Family: | DNA repair glycosylase, 2 C-terminal domains |
Alignment:
Information:
Download full alignment in MSF format: a_96_1_3.msfDownload structural alignment: a_96_1_3.pdb
Quality of structural alignment: high
Method of structural alignment: SSM
Description: specific contact with minor groove of DNA by 2 helices and 1 turn
| PDB: | Chain: | Residues: | Model number: |
| 1mpg | A | 100-282 | 1 |
| 1mpg | B | 100-282 | 2 |
| 1pvs | A | 100-282 | 3 |
| 1pvs | B | 100-282 | 4 |
| 1diz | A | 100-282 | 5 |
| 1diz | B | 100-282 | 6 |
| 1m3q | A | 136-325 | 7 |
| 2noh | A | 136-325 | 8 |
| 1lwy | A | 136-325 | 9 |
| 1ko9 | A | 136-323 | 10 |
| 2nob | A | 136-325 | 11 |
| 1m3h | A | 136-325 | 12 |
| 1ebm | A | 136-325 | 13 |
| 1lww | A | 136-325 | 14 |
| 2noe | A | 136-325 | 15 |
| 1n39 | A | 136-325 | 16 |
| 1hu0 | A | 136-325 | 17 |
| 1n3a | A | 136-325 | 18 |
| 1lwv | A | 136-325 | 19 |
| 2nof | A | 136-323 | 20 |
| 1yqr | A | 136-325 | 21 |
| 2nol | A | 136-325 | 22 |
| 1yqm | A | 136-325 | 23 |
| 2noz | A | 136-323 | 24 |
| 1yqk | A | 136-323 | 25 |
| 1yql | A | 136-325 | 26 |
| 1fn7 | A | 136-325 | 27 |
| 2i5w | A | 136-323 | 28 |
| 1n3c | A | 136-325 | 29 |
Example 1m3q:
| Protein domain: | 8-oxoguanine glycosylase |
| Species: | Human (Homo sapiens) [TaxId: 9606] |
