Документ взят из кэша поисковой машины. Адрес оригинального документа : http://monkey.belozersky.msu.su/npidb/pdb/pdb_new/stride/4lb6.std.txt Дата изменения: Mon Jan 13 19:22:50 2014 Дата индексирования: Fri Feb 28 17:36:41 2014 Кодировка:

REM -------------------------------------------------------------------- 4LB6
REM 4LB6
REM STRIDE: Knowledge-based secondary structure assignment 4LB6
REM Please cite: D.Frishman & P.Argos, Proteins 23, 566-579, 1995 4LB6
REM 4LB6
REM Residue accessible surface area calculation 4LB6
REM Please cite: F.Eisenhaber & P.Argos, J.Comp.Chem. 14, 1272-1280, 1993 4LB6
REM F.Eisenhaber et al., J.Comp.Chem., 1994, submitted 4LB6
REM 4LB6
REM ------------------------ General information ----------------------- 4LB6
REM 4LB6
HDR TRANSFERASE/DNA 20-JUN-13 4LB6 4LB6
CMP MOL_ID: 1; 4LB6
CMP MOLECULE: PROTEIN KINASE CONTAINING Z-DNA BINDING DOMAINS; 4LB6
CMP CHAIN: B; 4LB6
CMP FRAGMENT: ZALPHA DOMAIN, UNP RESIDUES 5-70; 4LB6
CMP SYNONYM: UNCHARACTERIZED PROTEIN, Z-DNA BINDING PROTEIN KINA 4LB6
CMP EC: 2.7.11.1; 4LB6
CMP ENGINEERED: YES; 4LB6
CMP MOL_ID: 2; 4LB6
CMP MOLECULE: 5'-D(*TP*CP*GP*CP*GP*CP*GP*CP*GP*CP*GP*CP*G)-3'; 4LB6
CMP CHAIN: C; 4LB6
CMP ENGINEERED: YES 4LB6
SRC MOL_ID: 1; 4LB6
SRC ORGANISM_SCIENTIFIC: DANIO RERIO; 4LB6
SRC ORGANISM_COMMON: LEOPARD DANIO,ZEBRA DANIO,ZEBRA FISH; 4LB6
SRC ORGANISM_TAXID: 7955; 4LB6
SRC GENE: PKZ; 4LB6
SRC EXPRESSION_SYSTEM: ESCHERICHIA COLI; 4LB6
SRC EXPRESSION_SYSTEM_TAXID: 469008; 4LB6
SRC EXPRESSION_SYSTEM_STRAIN: BL21 (DE3); 4LB6
SRC EXPRESSION_SYSTEM_PLASMID: PET28B; 4LB6
SRC MOL_ID: 2; 4LB6
SRC SYNTHETIC: YES; 4LB6
SRC OTHER_DETAILS: SYNTHETIC OLIGONUCLEOTIDE 4LB6
AUT M.DE ROSA,S.ZACARIAS,A.ATHANASIADIS 4LB6
REM 4LB6
REM -------------------- Secondary structure summary ------------------- 4LB6
REM 4LB6
CHN /data/npidb/pdb/pdb_new/all/pdb4lb6.pdb B 4LB6
REM 4LB6
REM . . . . . 4LB6
SEQ 1 ENEIEMRICDYLRRHGRSTVQDIFKELKLEKSTVNRHLYSLQASKQVFKT 50 4LB6
STR HHHHHHHHHHHHHH B HHHHHHHH HHHHHHHHHHHHHH EEEE 4LB6
REM 4LB6
REM . 4LB6
SEQ 51 VEDNKRPVWNLVE 63 4LB6
STR TTTT EEEE 4LB6
REM 4LB6
REM 4LB6
REM 4LB6
LOC AlphaHelix ASN 8 B HIS 21 B 4LB6
LOC AlphaHelix VAL 26 B LEU 33 B 4LB6
LOC AlphaHelix LYS 37 B SER 50 B 4LB6
LOC Strand VAL 53 B THR 56 B 4LB6
LOC Strand VAL 64 B LEU 67 B 4LB6
LOC TurnII' GLU 58 B LYS 61 B 4LB6
REM 4LB6
REM --------------- Detailed secondary structure assignment------------- 4LB6
REM 4LB6
REM |---Residue---| |--Structure--| |-Phi-| |-Psi-| |-Area-| 4LB6
ASG GLU B 7 1 C Coil 360.00 133.06 148.7 4LB6
ASG ASN B 8 2 H AlphaHelix -61.37 -30.62 130.0 4LB6
ASG GLU B 9 3 H AlphaHelix -66.73 -44.18 103.8 4LB6
ASG ILE B 10 4 H AlphaHelix -59.23 -46.32 24.9 4LB6
ASG GLU B 11 5 H AlphaHelix -68.33 -39.52 36.9 4LB6
ASG MET B 12 6 H AlphaHelix -59.34 -43.25 119.8 4LB6
ASG ARG B 13 7 H AlphaHelix -66.54 -36.28 84.3 4LB6
ASG ILE B 14 8 H AlphaHelix -66.14 -45.41 0.0 4LB6
ASG CYS B 15 9 H AlphaHelix -68.84 -33.00 25.7 4LB6
ASG ASP B 16 10 H AlphaHelix -69.54 -37.94 57.8 4LB6
ASG TYR B 17 11 H AlphaHelix -57.05 -49.87 12.6 4LB6
ASG LEU B 18 12 H AlphaHelix -62.68 -38.37 1.2 4LB6
ASG ARG B 19 13 H AlphaHelix -57.21 -43.81 158.1 4LB6
ASG ARG B 20 14 H AlphaHelix -80.67 -29.55 108.5 4LB6
ASG HIS B 21 15 H AlphaHelix -107.84 -12.66 92.3 4LB6
ASG GLY B 22 16 C Coil 62.79 -152.19 22.0 4LB6
ASG ARG B 23 17 C Coil -45.86 123.66 142.9 4LB6
ASG SER B 24 18 B Bridge -146.72 152.90 3.9 4LB6
ASG THR B 25 19 C Coil -92.40 164.23 20.4 4LB6
ASG VAL B 26 20 H AlphaHelix -58.72 -31.90 8.2 4LB6
ASG GLN B 27 21 H AlphaHelix -64.73 -43.48 31.9 4LB6
ASG ASP B 28 22 H AlphaHelix -47.48 -50.72 74.4 4LB6
ASG ILE B 29 23 H AlphaHelix -75.57 -48.11 0.0 4LB6
ASG PHE B 30 24 H AlphaHelix -67.17 -31.43 52.6 4LB6
ASG LYS B 31 25 H AlphaHelix -71.60 -37.30 146.7 4LB6
ASG GLU B 32 26 H AlphaHelix -71.52 -42.36 99.7 4LB6
ASG LEU B 33 27 H AlphaHelix -81.28 -10.17 11.9 4LB6
ASG LYS B 34 28 C Coil 52.63 52.96 186.5 4LB6
ASG LEU B 35 29 C Coil -121.38 166.53 38.5 4LB6
ASG GLU B 36 30 C Coil -69.17 147.37 141.4 4LB6
ASG LYS B 37 31 H AlphaHelix -56.70 -44.14 92.5 4LB6
ASG SER B 38 32 H AlphaHelix -64.62 -35.59 64.0 4LB6
ASG THR B 39 33 H AlphaHelix -66.90 -42.71 32.7 4LB6
ASG VAL B 40 34 H AlphaHelix -65.56 -43.17 0.0 4LB6
ASG ASN B 41 35 H AlphaHelix -61.92 -41.28 35.9 4LB6
ASG ARG B 42 36 H AlphaHelix -53.92 -48.07 148.4 4LB6
ASG HIS B 43 37 H AlphaHelix -70.70 -34.51 24.7 4LB6
ASG LEU B 44 38 H AlphaHelix -62.48 -45.10 0.0 4LB6
ASG TYR B 45 39 H AlphaHelix -64.46 -42.49 96.7 4LB6
ASG SER B 46 40 H AlphaHelix -59.81 -43.03 56.0 4LB6
ASG LEU B 47 41 H AlphaHelix -68.23 -30.40 0.6 4LB6
ASG GLN B 48 42 H AlphaHelix -66.77 -38.93 55.7 4LB6
ASG ALA B 49 43 H AlphaHelix -67.36 -29.10 82.8 4LB6
ASG SER B 50 44 H AlphaHelix -95.99 17.43 57.2 4LB6
ASG LYS B 51 45 C Coil 56.19 29.74 168.9 4LB6
ASG GLN B 52 46 C Coil -96.35 -27.27 99.8 4LB6
ASG VAL B 53 47 E Strand -136.38 167.35 1.8 4LB6
ASG PHE B 54 48 E Strand -143.23 155.70 83.7 4LB6
ASG LYS B 55 49 E Strand -117.66 153.95 63.0 4LB6
ASG THR B 56 50 E Strand -121.73 142.83 51.6 4LB6
ASG VAL B 57 51 C Coil -135.13 147.66 91.3 4LB6
ASG GLU B 58 52 T Turn -142.73 120.03 112.8 4LB6
ASG ASP B 59 53 T Turn 49.01 -130.94 150.8 4LB6
ASG ASN B 60 54 T Turn -95.29 16.50 174.5 4LB6
ASG LYS B 61 55 T Turn -68.87 162.70 119.9 4LB6
ASG ARG B 62 56 C Coil -60.10 128.39 137.6 4LB6
ASG PRO B 63 57 C Coil -59.09 149.92 38.6 4LB6
ASG VAL B 64 58 E Strand -119.12 131.37 25.5 4LB6
ASG TRP B 65 59 E Strand -109.05 148.00 1.2 4LB6
ASG ASN B 66 60 E Strand -152.53 168.36 41.1 4LB6
ASG LEU B 67 61 E Strand -69.83 140.33 47.1 4LB6
ASG VAL B 68 62 C Coil -61.31 134.85 56.8 4LB6
ASG GLU B 69 63 C Coil 50.82 360.00 221.4 4LB6