Документ взят из кэша поисковой машины. Адрес оригинального документа : http://monkey.belozersky.msu.su/npidb/pdb/pdb_new/stride/2ff0.std.txt Дата изменения: Wed Jan 19 01:08:53 2011 Дата индексирования: Fri Feb 11 21:17:26 2011 Кодировка:

REM -------------------------------------------------------------------- 2FF0
REM 2FF0
REM STRIDE: Knowledge-based secondary structure assignment 2FF0
REM Please cite: D.Frishman & P.Argos, Proteins 23, 566-579, 1995 2FF0
REM 2FF0
REM Residue accessible surface area calculation 2FF0
REM Please cite: F.Eisenhaber & P.Argos, J.Comp.Chem. 14, 1272-1280, 1993 2FF0
REM F.Eisenhaber et al., J.Comp.Chem., 1994, submitted 2FF0
REM 2FF0
REM ------------------------ General information ----------------------- 2FF0
REM 2FF0
HDR HORMONE/GROWTH FACTOR/DNA 17-DEC-05 2FF0 2FF0
CMP MOL_ID: 1; 2FF0
CMP MOLECULE: STEROIDOGENIC FACTOR 1; 2FF0
CMP CHAIN: A; 2FF0
CMP FRAGMENT: DNA BINDING DOMAIN; 2FF0
CMP SYNONYM: STF-1, SF-1, ADRENAL 4 BINDING PROTEIN, STEROID 2FF0
CMP HORMONE RECEPTOR AD4BP, FUSHI TARAZU FACTOR HOMOLOG 1, 2FF0
CMP EMBRYONAL LTR BINDING PROTEIN, ELP, EMBRYONAL LONG 2FF0
CMP TERMINAL REPEAT- BINDING PROTEIN, STEROID HYDROXYLASE 2FF0
CMP POSITIVE REGULATOR; 2FF0
CMP ENGINEERED: YES; 2FF0
CMP MOL_ID: 2; 2FF0
CMP MOLECULE: GGCTCAGGGCCACAG; 2FF0
CMP CHAIN: B; 2FF0
CMP FRAGMENT: INHIBIN ALPHA-SUBUNIT PROMOTER; 2FF0
CMP ENGINEERED: YES; 2FF0
CMP MOL_ID: 3; 2FF0
CMP MOLECULE: CTGTGGCCCTGAGCC; 2FF0
CMP CHAIN: C; 2FF0
CMP FRAGMENT: INHIBIN ALPHA-SUBUNIT PROMOTER; 2FF0
CMP ENGINEERED: YES 2FF0
SRC MOL_ID: 1; 2FF0
SRC ORGANISM_SCIENTIFIC: MUS MUSCULUS; 2FF0
SRC ORGANISM_COMMON: HOUSE MOUSE; 2FF0
SRC ORGANISM_TAXID: 10090; 2FF0
SRC GENE: NR5A1, FTZF1; 2FF0
SRC EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); 2FF0
SRC EXPRESSION_SYSTEM_TAXID: 469008; 2FF0
SRC EXPRESSION_SYSTEM_STRAIN: BL21(DE3); 2FF0
SRC EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; 2FF0
SRC EXPRESSION_SYSTEM_PLASMID: PMCSG7; 2FF0
SRC MOL_ID: 2; 2FF0
SRC SYNTHETIC: YES; 2FF0
SRC OTHER_DETAILS: THE DNA SEQUENCE WAS SYNTHESIZED VIA 2FF0
SRC AUTOMATED METHODS; 2FF0
SRC MOL_ID: 3; 2FF0
SRC SYNTHETIC: YES; 2FF0
SRC OTHER_DETAILS: THE DNA SEQUENCE WAS SYNTHESIZED VIA 2FF0
SRC AUTOMATED METHODS 2FF0
AUT T.H.LITTLE,Y.ZHANG,C.K.MATULIS,J.WECK,Z.ZHANG, 2FF0
AUT A.RAMACHANDRAN,K.E.MAYO,I.RADHAKRISHNAN 2FF0
REM 2FF0
REM -------------------- Secondary structure summary ------------------- 2FF0
REM 2FF0
CHN /data/npidb/pdb/pdb_new/all/pdb2ff0.pdb A 2FF0
REM 2FF0
REM . . . . . 2FF0
SEQ 1 DELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKHYTCTESQSCKIDK 50 2FF0
STR BTTTTT B EEETTEEE HHHHHHHHHHHHH TTTTTTT 2FF0
REM 2FF0
REM . . . . . 2FF0
SEQ 51 TQRKRCPFCRFQKCLTVGMRLEAVRADRMRGGRNKFGPMYKRDRALKQQK 100 2FF0
STR HHHHH HHHHHHHHHHH GGG TTTTTTTT TTTHHHHHHHHHHHH 2FF0
REM 2FF0
REM 2FF0
SEQ 101 KA 102 2FF0
STR 2FF0
REM 2FF0
REM 2FF0
REM 2FF0
LOC AlphaHelix GLU 31 A ASN 43 A 2FF0
LOC AlphaHelix THR 60 A ARG 64 A 2FF0
LOC AlphaHelix PRO 66 A VAL 76 A 2FF0
LOC AlphaHelix GLY 96 A GLN 107 A 2FF0
LOC 310Helix LEU 80 A ALA 82 A 2FF0
LOC Strand GLY 22 A HIS 24 A 2FF0
LOC Strand LEU 27 A THR 29 A 2FF0
LOC TurnIV CYS 13 A CYS 16 A 2FF0
LOC TurnIV PRO 14 A GLY 17 A 2FF0
LOC TurnIV TYR 23 A GLY 26 A 2FF0
LOC TurnI' HIS 24 A LEU 27 A 2FF0
LOC TurnVIII CYS 49 A SER 52 A 2FF0
LOC TurnVIII SER 52 A CYS 55 A 2FF0
LOC TurnIV ARG 84 A ARG 87 A 2FF0
LOC TurnIV MET 88 A GLY 91 A 2FF0
LOC TurnI ASN 93 A GLY 96 A 2FF0
REM 2FF0
REM --------------- Detailed secondary structure assignment------------- 2FF0
REM 2FF0
REM |---Residue---| |--Structure--| |-Phi-| |-Psi-| |-Area-| 2FF0
ASG ASP A 10 1 C Coil 360.00 -7.28 191.3 2FF0
ASG GLU A 11 2 C Coil -106.02 148.21 60.7 2FF0
ASG LEU A 12 3 B Bridge -111.74 153.07 98.3 2FF0
ASG CYS A 13 4 T Turn -66.03 137.25 6.1 2FF0
ASG PRO A 14 5 T Turn -67.27 -13.19 57.4 2FF0
ASG VAL A 15 6 T Turn -104.03 -81.88 4.3 2FF0
ASG CYS A 16 7 T Turn -69.65 -31.82 0.6 2FF0
ASG GLY A 17 8 T Turn 93.45 14.44 17.2 2FF0
ASG ASP A 18 9 C Coil -83.76 164.55 32.1 2FF0
ASG LYS A 19 10 B Bridge -65.22 127.90 155.5 2FF0
ASG VAL A 20 11 C Coil -76.35 136.80 30.4 2FF0
ASG SER A 21 12 C Coil -90.61 -12.45 66.7 2FF0
ASG GLY A 22 13 E Strand 147.13 -165.04 13.0 2FF0
ASG TYR A 23 14 E Strand -72.38 112.60 29.9 2FF0
ASG HIS A 24 15 E Strand -134.25 125.99 37.4 2FF0
ASG TYR A 25 16 T Turn 64.33 21.36 22.1 2FF0
ASG GLY A 26 17 T Turn 101.43 0.22 10.5 2FF0
ASG LEU A 27 18 E Strand -139.25 158.70 34.3 2FF0
ASG LEU A 28 19 E Strand -70.61 106.24 21.8 2FF0
ASG THR A 29 20 E Strand -139.10 164.92 0.0 2FF0
ASG CYS A 30 21 C Coil -95.52 177.19 7.2 2FF0
ASG GLU A 31 22 H AlphaHelix -70.01 -20.78 90.7 2FF0
ASG SER A 32 23 H AlphaHelix -66.08 -45.54 48.8 2FF0
ASG CYS A 33 24 H AlphaHelix -63.78 -52.67 0.7 2FF0
ASG LYS A 34 25 H AlphaHelix -54.11 -51.91 66.5 2FF0
ASG GLY A 35 26 H AlphaHelix -64.89 -48.80 22.9 2FF0
ASG PHE A 36 27 H AlphaHelix -66.74 -37.89 52.3 2FF0
ASG PHE A 37 28 H AlphaHelix -60.88 -47.13 1.0 2FF0
ASG LYS A 38 29 H AlphaHelix -61.38 -48.88 78.8 2FF0
ASG ARG A 39 30 H AlphaHelix -55.91 -33.70 170.8 2FF0
ASG THR A 40 31 H AlphaHelix -78.79 -57.97 2.2 2FF0
ASG VAL A 41 32 H AlphaHelix -70.58 -44.12 30.7 2FF0
ASG GLN A 42 33 H AlphaHelix -65.68 -43.31 57.2 2FF0
ASG ASN A 43 34 H AlphaHelix -82.20 6.87 97.9 2FF0
ASG ASN A 44 35 C Coil 58.02 41.43 134.4 2FF0
ASG LYS A 45 36 C Coil -78.43 142.80 86.5 2FF0
ASG HIS A 46 37 C Coil -143.52 128.04 162.5 2FF0
ASG TYR A 47 38 C Coil -123.57 176.05 96.4 2FF0
ASG THR A 48 39 C Coil -153.05 134.37 114.9 2FF0
ASG CYS A 49 40 T Turn -92.86 136.78 18.3 2FF0
ASG THR A 50 41 T Turn -60.54 -52.11 141.1 2FF0
ASG GLU A 51 42 T Turn -131.89 156.92 154.9 2FF0
ASG SER A 52 43 T Turn 46.81 86.91 78.6 2FF0
ASG GLN A 53 44 T Turn -60.63 -21.74 114.2 2FF0
ASG SER A 54 45 T Turn -118.94 81.80 97.3 2FF0
ASG CYS A 55 46 T Turn -75.90 179.42 25.6 2FF0
ASG LYS A 56 47 C Coil -75.91 105.39 130.5 2FF0
ASG ILE A 57 48 C Coil -77.86 95.00 17.5 2FF0
ASG ASP A 58 49 C Coil -116.94 -175.89 57.2 2FF0
ASG LYS A 59 50 C Coil -65.13 -34.23 121.3 2FF0
ASG THR A 60 51 H AlphaHelix -88.82 -48.03 110.1 2FF0
ASG GLN A 61 52 H AlphaHelix -73.89 -7.62 69.2 2FF0
ASG ARG A 62 53 H AlphaHelix -75.90 -11.70 38.3 2FF0
ASG LYS A 63 54 H AlphaHelix -92.83 -31.57 156.0 2FF0
ASG ARG A 64 55 H AlphaHelix -79.06 -34.04 173.4 2FF0
ASG CYS A 65 56 C Coil -116.49 92.90 6.7 2FF0
ASG PRO A 66 57 H AlphaHelix -66.63 -39.02 37.0 2FF0
ASG PHE A 67 58 H AlphaHelix -61.80 -47.04 29.9 2FF0
ASG CYS A 68 59 H AlphaHelix -64.10 -35.50 2.1 2FF0
ASG ARG A 69 60 H AlphaHelix -68.00 -41.88 11.6 2FF0
ASG PHE A 70 61 H AlphaHelix -60.83 -50.76 40.1 2FF0
ASG GLN A 71 62 H AlphaHelix -57.96 -39.82 57.3 2FF0
ASG LYS A 72 63 H AlphaHelix -58.80 -44.56 71.4 2FF0
ASG CYS A 73 64 H AlphaHelix -59.09 -54.43 0.6 2FF0
ASG LEU A 74 65 H AlphaHelix -61.63 -40.09 53.5 2FF0
ASG THR A 75 66 H AlphaHelix -63.79 -46.02 106.4 2FF0
ASG VAL A 76 67 H AlphaHelix -69.78 -18.76 39.9 2FF0
ASG GLY A 77 68 C Coil 123.86 15.88 35.6 2FF0
ASG MET A 78 69 C Coil -75.04 124.40 0.0 2FF0
ASG ARG A 79 70 C Coil -72.09 121.50 99.2 2FF0
ASG LEU A 80 71 G 310Helix -75.10 -29.23 68.3 2FF0
ASG GLU A 81 72 G 310Helix -69.73 -14.12 65.4 2FF0
ASG ALA A 82 73 G 310Helix -79.77 -9.21 8.9 2FF0
ASG VAL A 83 74 C Coil -82.36 97.22 16.2 2FF0
ASG ARG A 84 75 T Turn -79.05 78.01 107.2 2FF0
ASG ALA A 85 76 T Turn -65.04 -15.11 54.3 2FF0
ASG ASP A 86 77 T Turn -55.28 -76.47 101.0 2FF0
ASG ARG A 87 78 T Turn 165.82 -34.53 213.3 2FF0
ASG MET A 88 79 T Turn -52.72 114.84 119.9 2FF0
ASG ARG A 89 80 T Turn -67.35 -15.83 250.7 2FF0
ASG GLY A 90 81 T Turn -80.39 70.36 52.3 2FF0
ASG GLY A 91 82 T Turn -82.45 23.77 24.3 2FF0
ASG ARG A 92 83 C Coil -83.22 106.13 207.3 2FF0
ASG ASN A 93 84 T Turn -95.56 -166.38 63.4 2FF0
ASG LYS A 94 85 T Turn -59.93 -15.18 160.3 2FF0
ASG PHE A 95 86 T Turn -96.71 10.77 23.9 2FF0
ASG GLY A 96 87 H AlphaHelix -50.59 -47.58 12.1 2FF0
ASG PRO A 97 88 H AlphaHelix -53.71 -28.21 71.6 2FF0
ASG MET A 98 89 H AlphaHelix -63.24 -29.48 63.0 2FF0
ASG TYR A 99 90 H AlphaHelix -59.69 -56.75 37.7 2FF0
ASG LYS A 100 91 H AlphaHelix -73.26 -29.87 154.4 2FF0
ASG ARG A 101 92 H AlphaHelix -65.29 -54.78 161.5 2FF0
ASG ASP A 102 93 H AlphaHelix -60.94 -40.36 63.4 2FF0
ASG ARG A 103 94 H AlphaHelix -62.31 -42.07 147.7 2FF0
ASG ALA A 104 95 H AlphaHelix -70.37 -30.98 57.1 2FF0
ASG LEU A 105 96 H AlphaHelix -81.57 -44.39 112.6 2FF0
ASG LYS A 106 97 H AlphaHelix -60.52 -50.04 76.8 2FF0
ASG GLN A 107 98 H AlphaHelix -84.81 -66.55 89.1 2FF0
ASG GLN A 108 99 C Coil 62.62 13.50 150.2 2FF0
ASG LYS A 109 100 C Coil -68.06 143.55 162.7 2FF0
ASG LYS A 110 101 C Coil -92.98 171.12 183.2 2FF0
ASG ALA A 111 102 C Coil -102.12 360.00 170.0 2FF0