Документ взят из кэша поисковой машины. Адрес оригинального документа : http://monkey.belozersky.msu.su/npidb/pdb/pdb_new/stride/2mna.std.txt Дата изменения: Fri Oct 9 21:57:11 2015 Дата индексирования: Mon Apr 11 05:01:18 2016 Кодировка:

REM -------------------------------------------------------------------- 2MNA
REM 2MNA
REM STRIDE: Knowledge-based secondary structure assignment 2MNA
REM Please cite: D.Frishman & P.Argos, Proteins 23, 566-579, 1995 2MNA
REM 2MNA
REM Residue accessible surface area calculation 2MNA
REM Please cite: F.Eisenhaber & P.Argos, J.Comp.Chem. 14, 1272-1280, 1993 2MNA
REM F.Eisenhaber et al., J.Comp.Chem., 1994, submitted 2MNA
REM 2MNA
REM ------------------------ General information ----------------------- 2MNA
REM 2MNA
HDR DNA BINDING PROTEIN/DNA 02-APR-14 2MNA 2MNA
CMP MOL_ID: 1; 2MNA
CMP MOLECULE: SSDNA; 2MNA
CMP CHAIN: B; 2MNA
CMP ENGINEERED: YES; 2MNA
CMP MOL_ID: 2; 2MNA
CMP MOLECULE: SINGLE-STRANDED DNA BINDING PROTEIN (SSB); 2MNA
CMP CHAIN: A; 2MNA
CMP FRAGMENT: UNP RESIDUES 1-114; 2MNA
CMP ENGINEERED: YES 2MNA
SRC MOL_ID: 1; 2MNA
SRC SYNTHETIC: YES; 2MNA
SRC MOL_ID: 2; 2MNA
SRC ORGANISM_SCIENTIFIC: SULFOLOBUS SOLFATARICUS; 2MNA
SRC ORGANISM_TAXID: 273057; 2MNA
SRC STRAIN: ATCC 35092 / DSM 1617 / JCM 11322 / P2; 2MNA
SRC GENE: SSB, SSO2364; 2MNA
SRC EXPRESSION_SYSTEM: ESCHERICHIA COLI; 2MNA
SRC EXPRESSION_SYSTEM_TAXID: 562 2MNA
AUT R.GAMSJAEGER,R.KARIAWASAM,A.X.GIMENEZ,C.F.TOUMA,E.MCILWAIN, 2MNA
AUT R.E.BERNARDO,N.E.SHEPHERD,S.F.ATAIDE,A.Q.DONG,D.J.RICHARD,M. 2MNA
AUT L.CUBEDDU 2MNA
REM 2MNA
REM -------------------- Secondary structure summary ------------------- 2MNA
REM 2MNA
CHN /data/npidb/pdb/pdb_new/all/pdb2mna.pdb A 2MNA
REM 2MNA
REM . . . . . 2MNA
SEQ 1 MEEKVGNLKPNMESVNVTVRVLEASEARQIQTKNGVRTISEAIVGDETGR 50 2MNA
STR GGG TTTbTTT EEEEE EEEEETTEEEEEEEEEEEETTEE 2MNA
REM 2MNA
REM . . . . . 2MNA
SEQ 51 VKLTLWGKHAGSIKEGQVVKIENAWTTAFKGQVQLNAGSKTKIAEASEDG 100 2MNA
STR EEEEEETTTTTT TTTTEEEE EEEEETTEEEEEETTTT EE TTT 2MNA
REM 2MNA
REM . 2MNA
SEQ 101 FPESSQIPENTPTARRR 117 2MNA
STR T TTTTT 2MNA
REM 2MNA
REM 2MNA
REM 2MNA
LOC 310Helix VAL 5 A ASN 7 A 2MNA
LOC Strand VAL 17 A VAL 21 A 2MNA
LOC Strand ARG 28 A THR 32 A 2MNA
LOC Strand GLY 35 A ASP 46 A 2MNA
LOC Strand GLY 49 A TRP 56 A 2MNA
LOC Strand VAL 68 A ILE 71 A 2MNA
LOC Strand TRP 75 A PHE 79 A 2MNA
LOC Strand GLN 82 A ALA 87 A 2MNA
LOC Strand ALA 94 A GLU 95 A 2MNA
LOC TurnIV LYS 9 A MET 12 A 2MNA
LOC TurnIV MET 12 A VAL 15 A 2MNA
LOC TurnI THR 32 A GLY 35 A 2MNA
LOC TurnI ASP 46 A GLY 49 A 2MNA
LOC TurnII' TRP 56 A HIS 59 A 2MNA
LOC TurnI GLY 57 A ALA 60 A 2MNA
LOC TurnII HIS 59 A SER 62 A 2MNA
LOC TurnIV LYS 64 A GLN 67 A 2MNA
LOC TurnII ALA 78 A GLY 81 A 2MNA
LOC TurnI' PHE 79 A GLN 82 A 2MNA
LOC TurnI GLY 88 A THR 91 A 2MNA
LOC TurnIV GLU 98 A PHE 101 A 2MNA
LOC TurnI GLU 103 A GLN 106 A 2MNA
LOC TurnI SER 104 A ILE 107 A 2MNA
REM 2MNA
REM --------------- Detailed secondary structure assignment------------- 2MNA
REM 2MNA
REM |---Residue---| |--Structure--| |-Phi-| |-Psi-| |-Area-| 2MNA
ASG MET A 1 1 C Coil 360.00 16.56 218.8 2MNA
ASG GLU A 2 2 C Coil -118.81 129.05 98.6 2MNA
ASG GLU A 3 3 C Coil -95.79 171.12 50.7 2MNA
ASG LYS A 4 4 C Coil -97.27 173.74 113.1 2MNA
ASG VAL A 5 5 G 310Helix -73.34 -36.67 1.0 2MNA
ASG GLY A 6 6 G 310Helix -77.07 3.90 51.8 2MNA
ASG ASN A 7 7 G 310Helix -128.43 -0.37 112.3 2MNA
ASG LEU A 8 8 C Coil -76.57 157.02 13.0 2MNA
ASG LYS A 9 9 T Turn -139.65 152.03 115.9 2MNA
ASG PRO A 10 10 T Turn -77.82 166.35 18.7 2MNA
ASG ASN A 11 11 T Turn 72.09 28.60 147.3 2MNA
ASG MET A 12 12 b Bridge -109.26 124.81 35.8 2MNA
ASG GLU A 13 13 T Turn -83.47 14.87 153.2 2MNA
ASG SER A 14 14 T Turn -158.45 115.99 58.6 2MNA
ASG VAL A 15 15 T Turn -140.76 111.33 0.4 2MNA
ASG ASN A 16 16 C Coil -107.62 127.70 22.9 2MNA
ASG VAL A 17 17 E Strand -160.58 152.42 6.4 2MNA
ASG THR A 18 18 E Strand -115.60 126.59 26.8 2MNA
ASG VAL A 19 19 E Strand -148.14 -177.12 3.0 2MNA
ASG ARG A 20 20 E Strand -119.26 150.89 57.7 2MNA
ASG VAL A 21 21 E Strand -72.70 126.53 3.0 2MNA
ASG LEU A 22 22 C Coil -105.28 -22.87 29.2 2MNA
ASG GLU A 23 23 C Coil -163.71 167.20 128.3 2MNA
ASG ALA A 24 24 C Coil -163.14 127.12 39.9 2MNA
ASG SER A 25 25 C Coil -113.22 152.82 74.2 2MNA
ASG GLU A 26 26 C Coil -65.89 152.18 166.6 2MNA
ASG ALA A 27 27 C Coil -74.79 127.79 55.4 2MNA
ASG ARG A 28 28 E Strand -130.02 158.81 165.9 2MNA
ASG GLN A 29 29 E Strand -87.84 141.08 128.6 2MNA
ASG ILE A 30 30 E Strand -123.20 161.29 21.5 2MNA
ASG GLN A 31 31 E Strand -112.49 112.43 188.0 2MNA
ASG THR A 32 32 E Strand -109.31 -173.29 49.8 2MNA
ASG LYS A 33 33 T Turn -83.54 -8.14 199.6 2MNA
ASG ASN A 34 34 T Turn -109.62 6.54 117.1 2MNA
ASG GLY A 35 35 E Strand 121.96 -150.18 38.4 2MNA
ASG VAL A 36 36 E Strand -115.09 137.48 87.3 2MNA
ASG ARG A 37 37 E Strand -134.19 169.42 82.9 2MNA
ASG THR A 38 38 E Strand -119.76 106.75 61.1 2MNA
ASG ILE A 39 39 E Strand -130.71 171.78 19.7 2MNA
ASG SER A 40 40 E Strand -150.59 168.18 7.6 2MNA
ASG GLU A 41 41 E Strand -125.40 136.42 81.6 2MNA
ASG ALA A 42 42 E Strand -143.74 132.62 2.9 2MNA
ASG ILE A 43 43 E Strand -85.01 130.28 18.4 2MNA
ASG VAL A 44 44 E Strand -131.92 167.56 9.4 2MNA
ASG GLY A 45 45 E Strand 173.96 170.80 0.0 2MNA
ASG ASP A 46 46 E Strand -127.45 -164.00 7.6 2MNA
ASG GLU A 47 47 T Turn -76.44 1.68 130.6 2MNA
ASG THR A 48 48 T Turn -106.32 2.03 37.7 2MNA
ASG GLY A 49 49 E Strand 145.05 -148.47 0.2 2MNA
ASG ARG A 50 50 E Strand -157.27 143.09 82.4 2MNA
ASG VAL A 51 51 E Strand -147.81 133.96 7.5 2MNA
ASG LYS A 52 52 E Strand -68.37 129.61 59.1 2MNA
ASG LEU A 53 53 E Strand -101.96 137.39 4.0 2MNA
ASG THR A 54 54 E Strand -125.04 107.52 10.4 2MNA
ASG LEU A 55 55 E Strand -81.40 153.15 0.4 2MNA
ASG TRP A 56 56 E Strand -130.73 122.72 75.3 2MNA
ASG GLY A 57 57 T Turn 71.12 -99.39 29.2 2MNA
ASG LYS A 58 58 T Turn -81.87 -24.20 126.1 2MNA
ASG HIS A 59 59 T Turn -69.61 -22.36 23.9 2MNA
ASG ALA A 60 60 T Turn -57.13 122.83 9.6 2MNA
ASG GLY A 61 61 T Turn 57.62 8.00 37.3 2MNA
ASG SER A 62 62 T Turn -84.48 -18.54 81.8 2MNA
ASG ILE A 63 63 C Coil -75.63 171.48 39.2 2MNA
ASG LYS A 64 64 T Turn -102.52 -172.80 123.7 2MNA
ASG GLU A 65 65 T Turn -90.74 -173.50 157.2 2MNA
ASG GLY A 66 66 T Turn -40.37 84.61 40.3 2MNA
ASG GLN A 67 67 T Turn -137.22 160.80 28.4 2MNA
ASG VAL A 68 68 E Strand -78.39 114.40 27.7 2MNA
ASG VAL A 69 69 E Strand -118.84 177.60 9.0 2MNA
ASG LYS A 70 70 E Strand -140.68 107.89 78.3 2MNA
ASG ILE A 71 71 E Strand -77.14 142.76 4.8 2MNA
ASG GLU A 72 72 C Coil -115.15 -177.37 56.5 2MNA
ASG ASN A 73 73 C Coil -50.09 102.60 46.9 2MNA
ASG ALA A 74 74 C Coil -122.85 -99.80 0.0 2MNA
ASG TRP A 75 75 E Strand 174.44 171.19 67.5 2MNA
ASG THR A 76 76 E Strand -135.83 133.97 4.9 2MNA
ASG THR A 77 77 E Strand -130.79 130.16 57.6 2MNA
ASG ALA A 78 78 E Strand -86.01 106.45 52.3 2MNA
ASG PHE A 79 79 E Strand -99.70 121.55 115.3 2MNA
ASG LYS A 80 80 T Turn 63.18 19.13 177.3 2MNA
ASG GLY A 81 81 T Turn 100.94 -12.33 37.6 2MNA
ASG GLN A 82 82 E Strand -102.62 141.61 63.6 2MNA
ASG VAL A 83 83 E Strand -72.33 152.60 5.7 2MNA
ASG GLN A 84 84 E Strand -144.24 154.15 35.5 2MNA
ASG LEU A 85 85 E Strand -119.00 149.89 3.6 2MNA
ASG ASN A 86 86 E Strand -136.77 173.55 6.8 2MNA
ASG ALA A 87 87 E Strand -140.31 118.68 0.0 2MNA
ASG GLY A 88 88 T Turn -122.76 -127.71 5.2 2MNA
ASG SER A 89 89 T Turn -80.51 -55.41 85.2 2MNA
ASG LYS A 90 90 T Turn -68.60 -2.27 104.3 2MNA
ASG THR A 91 91 T Turn -97.89 129.15 0.3 2MNA
ASG LYS A 92 92 C Coil -122.69 110.48 144.6 2MNA
ASG ILE A 93 93 C Coil -95.52 142.44 34.3 2MNA
ASG ALA A 94 94 E Strand -164.60 152.13 52.5 2MNA
ASG GLU A 95 95 E Strand -66.77 134.37 129.9 2MNA
ASG ALA A 96 96 C Coil -123.77 138.24 25.9 2MNA
ASG SER A 97 97 C Coil -109.87 125.05 114.0 2MNA
ASG GLU A 98 98 T Turn -128.79 -154.11 132.6 2MNA
ASG ASP A 99 99 T Turn -81.31 16.29 173.1 2MNA
ASG GLY A 100 100 T Turn 102.98 83.48 62.7 2MNA
ASG PHE A 101 101 T Turn -60.95 146.27 39.8 2MNA
ASG PRO A 102 102 C Coil -51.01 144.24 36.6 2MNA
ASG GLU A 103 103 T Turn -74.01 160.83 113.9 2MNA
ASG SER A 104 104 T Turn -64.64 -27.20 49.6 2MNA
ASG SER A 105 105 T Turn -81.96 -5.66 111.4 2MNA
ASG GLN A 106 106 T Turn -123.81 10.39 147.2 2MNA
ASG ILE A 107 107 T Turn -95.01 121.56 15.6 2MNA
ASG PRO A 108 108 C Coil -53.08 164.42 51.8 2MNA
ASG GLU A 109 109 C Coil -119.38 10.91 142.8 2MNA
ASG ASN A 110 110 C Coil -54.64 123.45 123.1 2MNA
ASG THR A 111 111 C Coil -89.36 112.97 66.6 2MNA
ASG PRO A 112 112 C Coil -57.24 139.27 11.8 2MNA
ASG THR A 113 113 C Coil -152.16 124.82 84.3 2MNA
ASG ALA A 114 114 C Coil -65.23 164.31 47.9 2MNA
ASG ARG A 115 115 C Coil -86.93 140.23 240.2 2MNA
ASG ARG A 116 116 C Coil -112.99 149.51 186.0 2MNA
ASG ARG A 117 117 C Coil -79.30 360.00 321.8 2MNA