Документ взят из кэша поисковой машины. Адрес оригинального документа : http://monkey.belozersky.msu.su/npidb/pdb/pdb_new/stride/1jk1.std.txt Дата изменения: Thu Jan 20 00:47:40 2011 Дата индексирования: Fri Feb 11 21:03:10 2011 Кодировка:

REM -------------------------------------------------------------------- 1JK1
REM 1JK1
REM STRIDE: Knowledge-based secondary structure assignment 1JK1
REM Please cite: D.Frishman & P.Argos, Proteins 23, 566-579, 1995 1JK1
REM 1JK1
REM Residue accessible surface area calculation 1JK1
REM Please cite: F.Eisenhaber & P.Argos, J.Comp.Chem. 14, 1272-1280, 1993 1JK1
REM F.Eisenhaber et al., J.Comp.Chem., 1994, submitted 1JK1
REM 1JK1
REM ------------------------ General information ----------------------- 1JK1
REM 1JK1
HDR TRANSCRIPTION/DNA 11-JUL-01 1JK1 1JK1
CMP MOL_ID: 1; 1JK1
CMP MOLECULE: 5'-D(*AP*GP*CP*GP*TP*GP*GP*GP*CP*GP*G)-3'; 1JK1
CMP CHAIN: B; 1JK1
CMP ENGINEERED: YES; 1JK1
CMP MOL_ID: 2; 1JK1
CMP MOLECULE: 5'-D(*TP*CP*CP*GP*CP*CP*CP*AP*CP*GP*C)-3'; 1JK1
CMP CHAIN: C; 1JK1
CMP ENGINEERED: YES; 1JK1
CMP MOL_ID: 3; 1JK1
CMP MOLECULE: ZIF268; 1JK1
CMP CHAIN: A; 1JK1
CMP FRAGMENT: ZINC FINGERS (RESIDUES 333-421); 1JK1
CMP SYNONYM: EARLY GROWTH RESPONSE PROTEIN 1; 1JK1
CMP ENGINEERED: YES; 1JK1
CMP MUTATION: YES 1JK1
SRC MOL_ID: 1; 1JK1
SRC SYNTHETIC: YES; 1JK1
SRC MOL_ID: 2; 1JK1
SRC SYNTHETIC: YES; 1JK1
SRC MOL_ID: 3; 1JK1
SRC ORGANISM_SCIENTIFIC: MUS MUSCULUS; 1JK1
SRC ORGANISM_COMMON: HOUSE MOUSE; 1JK1
SRC ORGANISM_TAXID: 10090; 1JK1
SRC EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); 1JK1
SRC EXPRESSION_SYSTEM_TAXID: 469008; 1JK1
SRC EXPRESSION_SYSTEM_STRAIN: BL21 (DE3); 1JK1
SRC EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; 1JK1
SRC EXPRESSION_SYSTEM_PLASMID: PZIFD20A 1JK1
AUT J.C.MILLER,C.O.PABO 1JK1
REM 1JK1
REM -------------------- Secondary structure summary ------------------- 1JK1
REM 1JK1
CHN /data/npidb/pdb/pdb_new/all/pdb1jk1.pdb A 1JK1
REM 1JK1
REM . . . . . 1JK1
SEQ 1 RPYACPVESCDRRFSRSAELTRHIRIHTGQKPFQCRICMRNFSRSDHLTT 50 1JK1
STR EE TTTT EETTHHHHHHHHHHHH EETTTTT EE HHHHHH 1JK1
REM 1JK1
REM . . . 1JK1
SEQ 51 HIRTHTGEKPFACDICGRKFARSDERKRHTKIHLR 85 1JK1
STR HHHHHH EETTTTT EE HHHHHHHHGGGG 1JK1
REM 1JK1
REM 1JK1
REM 1JK1
LOC AlphaHelix SER 119 A THR 130 A 1JK1
LOC AlphaHelix SER 147 A THR 158 A 1JK1
LOC AlphaHelix SER 175 A THR 182 A 1JK1
LOC 310Helix LYS 183 A LEU 186 A 1JK1
LOC Strand TYR 105 A ALA 106 A 1JK1
LOC Strand ARG 115 A PHE 116 A 1JK1
LOC Strand PHE 135 A GLN 136 A 1JK1
LOC Strand ASN 143 A PHE 144 A 1JK1
LOC Strand PHE 163 A ALA 164 A 1JK1
LOC Strand LYS 171 A PHE 172 A 1JK1
LOC TurnI VAL 109 A CYS 112 A 1JK1
LOC TurnVIII PHE 116 A SER 119 A 1JK1
LOC TurnIV CYS 137 A CYS 140 A 1JK1
LOC TurnI ARG 138 A MET 141 A 1JK1
LOC TurnIV CYS 165 A CYS 168 A 1JK1
LOC TurnI ASP 166 A GLY 169 A 1JK1
REM 1JK1
REM --------------- Detailed secondary structure assignment------------- 1JK1
REM 1JK1
REM |---Residue---| |--Structure--| |-Phi-| |-Psi-| |-Area-| 1JK1
ASG ARG A 103 1 C Coil 360.00 55.87 181.2 1JK1
ASG PRO A 104 2 C Coil -86.98 8.32 88.3 1JK1
ASG TYR A 105 3 E Strand -128.02 87.73 94.5 1JK1
ASG ALA A 106 4 E Strand -84.50 152.22 39.3 1JK1
ASG CYS A 107 5 C Coil -82.67 115.09 12.7 1JK1
ASG PRO A 108 6 C Coil -58.16 -37.01 100.7 1JK1
ASG VAL A 109 7 T Turn -52.72 121.25 38.9 1JK1
ASG GLU A 110 8 T Turn -51.56 -42.69 170.6 1JK1
ASG SER A 111 9 T Turn -82.11 15.44 106.5 1JK1
ASG CYS A 112 10 T Turn -129.37 138.07 26.4 1JK1
ASG ASP A 113 11 C Coil -114.20 44.36 158.7 1JK1
ASG ARG A 114 12 C Coil -100.37 148.83 139.7 1JK1
ASG ARG A 115 13 E Strand -139.89 136.36 129.2 1JK1
ASG PHE A 116 14 E Strand -120.16 152.54 31.5 1JK1
ASG SER A 117 15 T Turn -79.65 -22.06 86.6 1JK1
ASG ARG A 118 16 T Turn -135.62 148.59 152.9 1JK1
ASG SER A 119 17 H AlphaHelix -64.13 -38.79 49.9 1JK1
ASG ALA A 120 18 H AlphaHelix -51.81 -34.07 51.7 1JK1
ASG GLU A 121 19 H AlphaHelix -77.78 -30.77 43.4 1JK1
ASG LEU A 122 20 H AlphaHelix -71.42 -39.99 28.7 1JK1
ASG THR A 123 21 H AlphaHelix -61.76 -42.69 88.0 1JK1
ASG ARG A 124 22 H AlphaHelix -68.70 -44.67 97.7 1JK1
ASG HIS A 125 23 H AlphaHelix -63.75 -36.10 19.4 1JK1
ASG ILE A 126 24 H AlphaHelix -58.15 -31.05 46.7 1JK1
ASG ARG A 127 25 H AlphaHelix -58.38 -20.40 74.3 1JK1
ASG ILE A 128 26 H AlphaHelix -65.36 -41.38 120.1 1JK1
ASG HIS A 129 27 H AlphaHelix -79.61 -35.07 77.9 1JK1
ASG THR A 130 28 H AlphaHelix -79.26 -22.68 92.2 1JK1
ASG GLY A 131 29 C Coil 78.53 15.29 54.9 1JK1
ASG GLN A 132 30 C Coil -67.26 111.26 100.4 1JK1
ASG LYS A 133 31 C Coil -121.91 81.13 112.7 1JK1
ASG PRO A 134 32 C Coil -64.54 -18.11 56.7 1JK1
ASG PHE A 135 33 E Strand -116.71 110.78 61.1 1JK1
ASG GLN A 136 34 E Strand -101.48 145.92 85.9 1JK1
ASG CYS A 137 35 T Turn -88.13 123.12 0.2 1JK1
ASG ARG A 138 36 T Turn -59.27 -36.18 225.5 1JK1
ASG ILE A 139 37 T Turn -73.65 -52.16 102.1 1JK1
ASG CYS A 140 38 T Turn -108.92 -1.02 60.0 1JK1
ASG MET A 141 39 T Turn 64.06 19.45 103.8 1JK1
ASG ARG A 142 40 C Coil -82.79 137.89 151.7 1JK1
ASG ASN A 143 41 E Strand -91.33 148.85 67.6 1JK1
ASG PHE A 144 42 E Strand -134.72 150.99 25.9 1JK1
ASG SER A 145 43 C Coil -75.86 -26.51 50.9 1JK1
ASG ARG A 146 44 C Coil -129.81 145.66 64.4 1JK1
ASG SER A 147 45 H AlphaHelix -67.24 -41.60 63.3 1JK1
ASG ASP A 148 46 H AlphaHelix -65.51 -32.07 70.4 1JK1
ASG HIS A 149 47 H AlphaHelix -78.62 -27.66 87.4 1JK1
ASG LEU A 150 48 H AlphaHelix -67.39 -44.85 24.5 1JK1
ASG THR A 151 49 H AlphaHelix -53.42 -53.54 70.4 1JK1
ASG THR A 152 50 H AlphaHelix -65.82 -34.59 28.1 1JK1
ASG HIS A 153 51 H AlphaHelix -63.21 -38.88 30.9 1JK1
ASG ILE A 154 52 H AlphaHelix -59.47 -31.13 51.5 1JK1
ASG ARG A 155 53 H AlphaHelix -63.37 -19.27 44.1 1JK1
ASG THR A 156 54 H AlphaHelix -71.02 -19.84 102.1 1JK1
ASG HIS A 157 55 H AlphaHelix -93.11 -47.01 75.1 1JK1
ASG THR A 158 56 H AlphaHelix -78.69 -28.02 86.8 1JK1
ASG GLY A 159 57 C Coil 85.11 13.05 47.7 1JK1
ASG GLU A 160 58 C Coil -66.24 131.19 104.5 1JK1
ASG LYS A 161 59 C Coil -137.61 84.80 119.0 1JK1
ASG PRO A 162 60 C Coil -69.18 -12.28 61.8 1JK1
ASG PHE A 163 61 E Strand -113.32 109.07 55.4 1JK1
ASG ALA A 164 62 E Strand -102.27 138.40 41.4 1JK1
ASG CYS A 165 63 T Turn -66.07 132.17 4.6 1JK1
ASG ASP A 166 64 T Turn -64.44 -30.13 160.8 1JK1
ASG ILE A 167 65 T Turn -84.66 -47.99 111.7 1JK1
ASG CYS A 168 66 T Turn -115.51 -7.57 73.7 1JK1
ASG GLY A 169 67 T Turn 80.90 0.86 39.3 1JK1
ASG ARG A 170 68 C Coil -60.81 130.51 155.9 1JK1
ASG LYS A 171 69 E Strand -97.12 152.20 127.9 1JK1
ASG PHE A 172 70 E Strand -141.89 153.50 25.3 1JK1
ASG ALA A 173 71 C Coil -68.11 -37.05 16.2 1JK1
ASG ARG A 174 72 C Coil -120.01 153.10 103.5 1JK1
ASG SER A 175 73 H AlphaHelix -65.92 -31.32 60.4 1JK1
ASG ASP A 176 74 H AlphaHelix -72.24 -29.55 76.7 1JK1
ASG GLU A 177 75 H AlphaHelix -66.87 -45.45 55.0 1JK1
ASG ARG A 178 76 H AlphaHelix -62.68 -41.64 71.6 1JK1
ASG LYS A 179 77 H AlphaHelix -60.46 -45.83 124.3 1JK1
ASG ARG A 180 78 H AlphaHelix -61.76 -34.05 184.1 1JK1
ASG HIS A 181 79 H AlphaHelix -72.83 -52.06 19.4 1JK1
ASG THR A 182 80 H AlphaHelix -48.76 -38.31 41.3 1JK1
ASG LYS A 183 81 G 310Helix -58.52 -20.66 124.8 1JK1
ASG ILE A 184 82 G 310Helix -72.76 -11.04 91.8 1JK1
ASG HIS A 185 83 G 310Helix -84.33 0.29 71.6 1JK1
ASG LEU A 186 84 G 310Helix -88.49 -38.44 157.6 1JK1
ASG ARG A 187 85 C Coil 179.77 360.00 242.4 1JK1