Документ взят из кэша поисковой машины. Адрес оригинального документа : http://monkey.belozersky.msu.su/npidb/pdb/html_pfam/PF01381/support/hth3.msf Дата изменения: Wed Dec 26 00:00:00 2007 Дата индексирования: Tue Aug 18 09:46:57 2009 Кодировка:

GDC ******** GeneDoc Multiple Sequence Alignment Editor ********
GDC 0108c50190000cffffffffffff000000000000000000808080c0c0c0ffff
GDC ff000000000000f43f000000000000f43f000000000000f03f0000000000
GDC 00f03f00A000300000190000cA54696d6573204e657720526f6d616e00A0
GDC 0320002000000000000000000000601444e000245510003535400044b520
GDC 00546595700064c49564d00284e756d2c0d0a314c4c495f412c0d0a314c4
GDC c495f422c0d0a314c4d425f332c0d0a314c4d425f342c0d0a3152494f5f4
GDC 12c0d0a3152494f5f422c0d0a315045525f4c2c0d0a315045525f522c0d0
GDC a315250455f4c2c0d0a315250455f522c0d0a3343524f5f4c2c0d0a33435
GDC 24f5f522c0d0a3643524f5f522c0d0a32447374727563747572652c0d0a3
GDC 16c6c692c0d0a316c6d622c0d0a3172696f2c0d0a317065722c0d0a33637
GDC 26f2c0d0a3663726f2c0d0a416c69676e6564293b0d0a00BBAABAAB00000
GDC 02a000a00020001B20AAA000a203a2000203a20000000000000005940000
GDC 0000000000000000c5058000000ffff000047580000ff00ff00004147535
GDC 8000000ffffff0056434147444e535450580000ff00ffff00484b525800f
GDC f00000000ff4544580000ff000000ff484b5245445800ffffff0000ff485
GDC 24551444e425a5800ff000000ff005957484b524551444e5354425a58000
GDC 0000000ff00494c56415800ff00008080804659574858000000ff8080804
GDC 94c564341474d4659574854505800ffffff0000000c50580000000000000
GDC 0475800000000000000414347535800000000000000564147444e5354505
GDC 800000000000000484b52580000000000000045445800000000000000484
GDC b524544580000000000000048524551444e425a580000000000000043595
GDC 7484b524551444e5354425a5800000000000000494c56415800000000000
GDC 000465957485800000000000000494c564341474d4659574854505800000
GDC 0000000000300ffffff00000000ffffff80808000000000c0c0c00000ABB
GDC BBBBBBBBBBBB00ff00A00160001000100010001000100010001000100010
GDC 001000100010001000100010001000100010001000100010001A0018AA00
GDC 0000000000000000000003A00ff00A000000000080564000000000008051
GDC 4000000000000049400000020000000000001440A0000000098b20c41000
GDC 000001025064100000000189806410000000078b10b4100AAABB00005374
GDC 616e646172640046464c4c5353535359592a2a43432a574c4c4c4c505050
GDC 5048485151525252524949494d545454544e4e4b4b535352525656565641
GDC 4141414444454547474747002d2d2d2d2d2d2d2d2d2d2d2d2d2d2d2d2d2d
GDC 2d2d2d2d2d2d2d2d2d2d2d2d2d2d2d2d2d4d2d2d2d2d2d2d2d2d2d2d2d2d
GDC 2d2d2d2d2d2d2d2d2d2d2d2d2d2d2d2d00BBBBB000000000000001600000
GDC 000000000000000000000000000000000000000000000000000000000000
GDC 000000000000000000000030000002e000000ffffff0000004d000000fff
GDC fff00000051000000ffffff0003000000000000BBAB00160000000000000
GDC 00000000000000000000000000000000201b7B0000000000005940000000
GDC 00000054400000000000004e4000DAAB000000ffffff0302014445484b52
GDC 4e5153540000ff00ff0000024c49564d4659574147435000ff000000ff00
GDC 04014445484b520000ff00ff0000024e5153540000ff00ff8000034c4956
GDC 4d46595700ff000000ff0004414700ff0000008000080144450000ff00ff
GDC 000002484b5200ffffffff0000034e510000ff00ff800004535400ffffff
GDC ff8000054c495600ff000000ff000646595700ffffff00ff0007414700ff
GDC 0000008000084d4300ffffff0080000000000000Affffff80808000A0302
GDC 49A000000000000594000000000000054400000000000004e4007DBAB000
GDC 000ffff000302014445484b524e5153540000ff00ff0000024c49564d465
GDC 9574147435000ff000000ff0004014445484b520000ff00ff0000024e515
GDC 3540000ff00ff8000034c49564d46595700ff000000ff0004414700ff000
GDC 0008000080144450000ff00ff000002484b5200ffffffff0000034e51000
GDC 0ff00ff800004535400ffffffff8000054c495600ff000000ff000646595
GDC 700ffffff00ff0007414700ff0000008000084d4300ffffff00800000000
GDC 04c616d6264615f526570726573736f720009314c4c495f4100314c4c495
GDC f4200314c4d425f3300314c4d425f34003152494f5f41003152494f5f420
GDC 0316c6c6900316c6d62003172696f00Affffff80808000@030213A000000
GDC 000000594000000000000054400000000000004e4007DBAB00000000ff00
GDC 0302014445484b524e5153540000ff00ff0000024c49564d465957414743
GDC 5000ff000000ff0004014445484b520000ff00ff0000024e5153540000ff
GDC 00ff8000034c49564d46595700ff000000ff0004414700ff000000800008
GDC 0144450000ff00ff000002484b5200ffffffff0000034e510000ff00ff80
GDC 0004535400ffffffff8000054c495600ff000000ff000646595700ffffff
GDC 00ff0007414700ff0000008000084d4300ffffff0080000000003433345f
GDC 726570726573736f720005315045525f4c00315045525f5200315250455f
GDC 4c00315250455f52003170657200Affffff80808000@0301f1B000000000
GDC 000594000000000000054400000000000004e4000DAAB000000ff8000030
GDC 2014445484b524e5153540000ff00ff0000024c49564d465957414743500
GDC 0ff000000ff0004014445484b520000ff00ff0000024e5153540000ff00f
GDC f8000034c49564d46595700ff000000ff0004414700ff000000800008014
GDC 4450000ff00ff000002484b5200ffffffff0000034e510000ff00ff80000
GDC 4535400ffffffff8000054c495600ff000000ff000646595700ffffff00f
GDC f0007414700ff0000008000084d4300ffffff0080000000006c616d62646
GDC 12063726f00033343524f5f4c003343524f5f52003363726f00Affffff80
GDC 808000A0301ddB000000000000594000000000000054400000000000004e
GDC 4000DAAB00000080ffff0302014445484b524e5153540000ff00ff000002
GDC 4c49564d4659574147435000ff000000ff0004014445484b520000ff00ff
GDC 0000024e5153540000ff00ff8000034c49564d46595700ff000000ff0004
GDC 414700ff0000008000080144450000ff00ff000002484b5200ffffffff00
GDC 00034e510000ff00ff800004535400ffffffff8000054c495600ff000000
GDC ff000646595700ffffff00ff0007414700ff0000008000084d4300ffffff
GDC 0080000000003433342063726f00023643524f5f52003663726f00Afffff
GDC f80808000A
hth3.msf MSF: 141 Type: P December 26, 2007 15:44 Check: 2894 ..

Name: Num Len: 141 Check: 422 Weight: 1.00
Name: 1LLI_A Len: 141 Check: 8150 Weight: 1.00
Name: 1LLI_B Len: 141 Check: 8974 Weight: 1.00
Name: 1LMB_3 Len: 141 Check: 8077 Weight: 1.00
Name: 1LMB_4 Len: 141 Check: 9510 Weight: 1.00
Name: 1RIO_A Len: 141 Check: 5034 Weight: 1.00
Name: 1RIO_B Len: 141 Check: 4982 Weight: 1.00
Name: 1PER_L Len: 141 Check: 6700 Weight: 1.00
Name: 1PER_R Len: 141 Check: 6700 Weight: 1.00
Name: 1RPE_L Len: 141 Check: 6700 Weight: 1.00
Name: 1RPE_R Len: 141 Check: 6700 Weight: 1.00
Name: 3CRO_L Len: 141 Check: 7917 Weight: 1.00
Name: 3CRO_R Len: 141 Check: 5342 Weight: 1.00
Name: 6CRO_R Len: 141 Check: 335 Weight: 1.00
Name: 2Dstructure Len: 141 Check: 2566 Weight: 1.00
Name: 1lli Len: 141 Check: 7200 Weight: 1.00
Name: 1lmb Len: 141 Check: 7200 Weight: 1.00
Name: 1rio Len: 141 Check: 2842 Weight: 1.00
Name: 1per Len: 141 Check: 1990 Weight: 1.00
Name: 3cro Len: 141 Check: 6689 Weight: 1.00
Name: 6cro Len: 141 Check: 9798 Weight: 1.00
Name: Aligned Len: 141 Check: 9066 Weight: 1.00

//

1 50
Num ......1... 5.....0... .5....0... .5...101.. ..........
1LLI_A .........K KPL.TQEQLE DARRLKAIYE KKKNEL.GLS ..QESLADKL
1LLI_B ......STKK KPL.TQEQLE DARRLKAIYE KKKNEL.GLS ..QESLADKL
1LMB_3 .......... .PL.TQEQLE DARRLKAIYE KKKNEL.GLS ..QESVADKM
1LMB_4 ......STKK KPL.TQEQLE DARRLKAIYE KKKNEL.GLS ..QESVADKM
1RIO_A ......STKK KPL.TQEQLE DARRLKAIYE KKKNEL.GLS ..QESVADKX
1RIO_B ......STKK KPL.TQEQLE DARRLKAIYE KKKNEL.GLS ..QESVADKX
1PER_L .......... .......... ...SISSRVK SKRIQL.GLN ..QAELAQKV
1PER_R .......... .......... ...SISSRVK SKRIQL.GLN ..QAELAQKV
1RPE_L .......... .......... ...SISSRVK SKRIQL.GLN ..QAELAQKV
1RPE_R .......... .......... ...SISSRVK SKRIQL.GLN ..QAELAQKV
3CRO_L .......... .......... .MQTLSERLK KRRIAL.KMT ..QTELATKA
3CRO_R .......... .......... .MQTLSERLK KRRIAL.KMT ..QTELATKA
6CRO_R EQRIT..... .......... .......... LKDYAM.RFG ..QTKTAKDL
2Dstructure .......... .......... .......... .......... ..........
1lli .......... .....HHHHH HHHHHHHHHH HHHHHH.... ..HHHHHHHH
1lmb .......... .....HHHHH HHHHHHHHHH HHHHHH.... ..HHHHHHHH
1rio .......... ....HHHHHH HHHHHHHHHH HHHHHH.... ..HHHHHHHH
1per .......... .......... ...HHHHHHH HHHHHH.... ..HHHHHHHH
3cro .......... .......... ...HHHHHHH HHHHHH.... ..HHHHHHHH
6cro ..SSS..... .......... .......HHH HHHHH..... ..HHHHHHHH
Aligned .......... .......... ......LLLL LLLL...AAA ..AAAAAAAA

51 100
Num .......... ......201. .......... .......... ..........
1LLI_A .GMG.QSGIG ALFN.GI.NA LNAYNAALLA KILK.VSVEE FS....PSIA
1LLI_B .GMG.QSGIG ALFN.GI.NA LNAYNAALLA KILK.VSVEE FS....PSIA
1LMB_3 .GMG.QSGVG ALFN.GI.NA LNAYNAALLA KILK.VSVEE FS....PSIA
1LMB_4 .GMG.QSGVG ALFN.GI.NA LNAYNAALLA KILK.VSVEE FS....PSIA
1RIO_A .GXG.QSGVG ALFN.GI.NA LNAYNAALLA KILK.VSVEE FS....PSIA
1RIO_B .GXG.QSGVG ALFN.GI.NA LNAYNAALLA KILK.VSVEE FS....PSIA
1PER_L .GTT.QQSIE QLEN.GK.TK RPRFLPELAS ALG..VSVDW LLNGT.....
1PER_R .GTT.QQSIE QLEN.GK.TK RPRFLPELAS ALG..VSVDW LLNGT.....
1RPE_L .GTT.QQSIE QLEN.GK.TK RPRFLPELAS ALG..VSVDW LLNGT.....
1RPE_R .GTT.QQSIE QLEN.GK.TK RPRFLPELAS ALG..VSVDW LLNGT.....
3CRO_L .GVK.QQSIQ LIEA.GV.TK RPRFLFEIAM ALN..CDPVW LQYGTK....
3CRO_R .GVK.QQSIQ LIEA.GV.TK RPRFLFEIAM ALN..CDPVW LQYG......
6CRO_R .GVY.QSAIN KAIH.AG... .......... .......... ..........
2Dstructure .....DDDDD DDDD...... .......... .......... ..........
1lli .....HHHHH HHHH...... ..HHHHHHHH HHH....... ......HHHH
1lmb .....HHHHH HHHH...... ..HHHHHHHH HHH....... ......HHHH
1rio .....HHHHH HHHH...... .HHHHHHHHH HHHH..HHHH H.....HHHH
1per .....HHHHH HHHH...... ....HHHHHH H......HHH HHH.......
3cro .....HHHHH HHHH...... ....HHHHHH H......HHH HHH.......
6cro .....HHHHH HHHH...... .......... .......... ..........
Aligned .AAA.AAAAA AAAA.AA... ..LLLLLLLL LLL....... ..........

101 141
Num .......... .......... .......... .......... .
1LLI_A REIYEMYEAV S......... .......... .......... .
1LLI_B REIYEMYEAV S......... .......... .......... .
1LMB_3 REIYEMYEAV S......... .......... .......... .
1LMB_4 REIYEMYEAV S......... .......... .......... .
1RIO_A REIYEXYEAV HHHHHH.... .......... .......... .
1RIO_B REIYEXYEAV HHHHH..... .......... .......... .
1PER_L .......... .......... .......... .......... .
1PER_R .......... .......... .......... .......... .
1RPE_L .......... .......... .......... .......... .
1RPE_R .......... .......... .......... .......... .
3CRO_L .......... .......... .......... .......... .
3CRO_R .......... .......... .......... .......... .
6CRO_R .......... ....RKIFLT INADGSVYAE EVKPFPSN.. .
2Dstructure .......... .......... .......... .......... .
1lli HHHHHHHH.. .......... .......... .......... .
1lmb HHHHHHHH.. .......... .......... .......... .
1rio HHHHHHHH.. .......... .......... .......... .
1per .......... .......... .......... .......... .
3cro .......... .....SSSSS S......... .SSSSS.... .
6cro .......... .......... .......... .......... .
Aligned .......... .......... .......... .......... .