Документ взят из кэша поисковой машины. Адрес оригинального документа : http://monkey.belozersky.msu.ru/npidb/pdb/pdb_new/stride/2i5s.std.txt Дата изменения: Thu Jan 20 15:17:16 2011 Дата индексирования: Fri Feb 11 17:55:58 2011 Кодировка:

REM -------------------------------------------------------------------- 2I5S
REM 2I5S
REM STRIDE: Knowledge-based secondary structure assignment 2I5S
REM Please cite: D.Frishman & P.Argos, Proteins 23, 566-579, 1995 2I5S
REM 2I5S
REM Residue accessible surface area calculation 2I5S
REM Please cite: F.Eisenhaber & P.Argos, J.Comp.Chem. 14, 1272-1280, 1993 2I5S
REM F.Eisenhaber et al., J.Comp.Chem., 1994, submitted 2I5S
REM 2I5S
REM ------------------------ General information ----------------------- 2I5S
REM 2I5S
HDR HYDROLASE/DNA 25-AUG-06 2I5S 2I5S
CMP MOL_ID: 1; 2I5S
CMP MOLECULE: P-30 PROTEIN; 2I5S
CMP CHAIN: X; 2I5S
CMP SYNONYM: ONCONASE; 2I5S
CMP EC: 3.1.27.-; 2I5S
CMP ENGINEERED: YES; 2I5S
CMP MOL_ID: 2; 2I5S
CMP MOLECULE: 5'-D(*A*(DU)P*GP*A)-3'; 2I5S
CMP CHAIN: A; 2I5S
CMP ENGINEERED: YES 2I5S
SRC MOL_ID: 1; 2I5S
SRC ORGANISM_SCIENTIFIC: RANA PIPIENS; 2I5S
SRC ORGANISM_COMMON: NORTHERN LEOPARD FROG; 2I5S
SRC ORGANISM_TAXID: 8404; 2I5S
SRC GENE: RNP30_RANPI; 2I5S
SRC EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); 2I5S
SRC EXPRESSION_SYSTEM_TAXID: 469008; 2I5S
SRC EXPRESSION_SYSTEM_STRAIN: BL21(DE3); 2I5S
SRC EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; 2I5S
SRC EXPRESSION_SYSTEM_PLASMID: PET 22B(+); 2I5S
SRC MOL_ID: 2; 2I5S
SRC SYNTHETIC: YES 2I5S
AUT E.BAE,J.E.LEE,R.T.RAINES,G.E.WESENBERG,G.N.PHILLIPS JR., 2I5S
AUT E.BITTO,C.A.BINGMAN,CENTER FOR EUKARYOTIC STRUCTURAL 2I5S
AUT GENOMICS (CESG) 2I5S
REM 2I5S
REM -------------------- Secondary structure summary ------------------- 2I5S
REM 2I5S
CHN /data/npidb/pdb/pdb_new/all/pdb2i5s.pdb X 2I5S
REM 2I5S
REM . . . . . 2I5S
SEQ 1 DWLTFQKKHITNTRDVDCDNIMSTNLFHCKDKNTFIYSRPEPVKAICKGI 50 2I5S
STR HHHHHHHHEE TTTTTHHHHH TTTTTTT EEEEEE HHHHHHHTTTT 2I5S
REM 2I5S
REM . . . . . 2I5S
SEQ 51 IASKNVLTTSEFYLSDCNVTSRPCKYKLKKSTNKFCVTCENQAPVHFVGV 100 2I5S
STR EEEE EEEEEEEETTTTTTEEEEEEEE EEEEEETTEEEEEEEE 2I5S
REM 2I5S
REM 2I5S
SEQ 101 GSC 103 2I5S
STR TT 2I5S
REM 2I5S
REM 2I5S
REM 2I5S
LOC AlphaHelix TRP 3 X HIS 10 X 2I5S
LOC AlphaHelix CYS 19 X MET 23 X 2I5S
LOC AlphaHelix PRO 41 X ILE 47 X 2I5S
LOC Strand ILE 11 X THR 12 X 2I5S
LOC Strand LYS 33 X TYR 38 X 2I5S
LOC Strand LYS 55 X LEU 58 X 2I5S
LOC Strand PHE 63 X VAL 70 X 2I5S
LOC Strand TYR 77 X ASN 84 X 2I5S
LOC Strand PHE 86 X GLU 91 X 2I5S
LOC Strand ALA 94 X VAL 101 X 2I5S
LOC TurnIV THR 14 X VAL 17 X 2I5S
LOC TurnI THR 25 X PHE 28 X 2I5S
LOC TurnI ASN 26 X HIS 29 X 2I5S
LOC TurnIV PHE 28 X LYS 31 X 2I5S
LOC TurnII CYS 48 X ILE 51 X 2I5S
LOC TurnVIII THR 71 X PRO 74 X 2I5S
LOC TurnII ARG 73 X LYS 76 X 2I5S
LOC TurnIV CYS 90 X GLN 93 X 2I5S
LOC TurnI' GLU 91 X ALA 94 X 2I5S
LOC TurnIV GLY 100 X SER 103 X 2I5S
LOC GammaInv VAL 17 X CYS 19 X 2I5S
LOC Disulfide CYS 19 X CYS 68 X PDB 2I5S
LOC Disulfide CYS 30 X CYS 75 X PDB 2I5S
LOC Disulfide CYS 48 X CYS 90 X PDB 2I5S
LOC Disulfide CYS 87 X CYS 104 X PDB 2I5S
REM 2I5S
REM --------------- Detailed secondary structure assignment------------- 2I5S
REM 2I5S
REM |---Residue---| |--Structure--| |-Phi-| |-Psi-| |-Area-| 2I5S
ASG ASP X 2 1 C Coil 360.00 171.08 108.9 2I5S
ASG TRP X 3 2 H AlphaHelix -72.13 -37.45 46.5 2I5S
ASG LEU X 4 3 H AlphaHelix -56.32 -44.63 110.7 2I5S
ASG THR X 5 4 H AlphaHelix -75.65 -35.54 40.7 2I5S
ASG PHE X 6 5 H AlphaHelix -55.77 -45.86 5.0 2I5S
ASG GLN X 7 6 H AlphaHelix -56.68 -43.72 60.6 2I5S
ASG LYS X 8 7 H AlphaHelix -67.72 -36.89 122.4 2I5S
ASG LYS X 9 8 H AlphaHelix -84.64 -32.20 76.4 2I5S
ASG HIS X 10 9 H AlphaHelix -127.34 0.81 18.6 2I5S
ASG ILE X 11 10 E Strand -117.76 128.18 30.5 2I5S
ASG THR X 12 11 E Strand -125.33 145.48 14.7 2I5S
ASG ASN X 13 12 C Coil -101.04 9.51 147.1 2I5S
ASG THR X 14 13 T Turn -138.40 140.68 55.6 2I5S
ASG ARG X 15 14 T Turn -69.53 -27.04 49.4 2I5S
ASG ASP X 16 15 T Turn -89.67 65.65 101.4 2I5S
ASG VAL X 17 16 T Turn -63.00 135.67 13.7 2I5S
ASG ASP X 18 17 T Turn -83.64 76.32 103.7 2I5S
ASG CYS X 19 18 H AlphaHelix -52.65 -55.52 7.8 2I5S
ASG ASP X 20 19 H AlphaHelix -55.90 -30.89 60.7 2I5S
ASG ASN X 21 20 H AlphaHelix -77.69 -62.47 97.7 2I5S
ASG ILE X 22 21 H AlphaHelix -63.84 -38.42 47.1 2I5S
ASG MET X 23 22 H AlphaHelix -68.53 -22.31 0.0 2I5S
ASG SER X 24 23 C Coil -81.43 -12.40 60.6 2I5S
ASG THR X 25 24 T Turn -71.11 170.93 50.5 2I5S
ASG ASN X 26 25 T Turn -69.04 -14.74 135.0 2I5S
ASG LEU X 27 26 T Turn -65.39 -32.80 63.2 2I5S
ASG PHE X 28 27 T Turn -122.22 -21.32 9.0 2I5S
ASG HIS X 29 28 T Turn 49.81 42.16 132.6 2I5S
ASG CYS X 30 29 T Turn 56.14 33.67 49.0 2I5S
ASG LYS X 31 30 T Turn -67.64 168.94 100.0 2I5S
ASG ASP X 32 31 C Coil -65.12 -40.28 117.6 2I5S
ASG LYS X 33 32 E Strand -148.03 140.85 96.4 2I5S
ASG ASN X 34 33 E Strand -147.42 136.08 10.1 2I5S
ASG THR X 35 34 E Strand -94.96 120.68 7.9 2I5S
ASG PHE X 36 35 E Strand -102.82 135.91 3.8 2I5S
ASG ILE X 37 36 E Strand -102.22 121.42 0.0 2I5S
ASG TYR X 38 37 E Strand -90.03 101.55 101.9 2I5S
ASG SER X 39 38 C Coil -170.83 157.93 26.3 2I5S
ASG ARG X 40 39 C Coil -70.40 157.15 174.0 2I5S
ASG PRO X 41 40 H AlphaHelix -69.46 -32.79 40.3 2I5S
ASG GLU X 42 41 H AlphaHelix -57.75 -48.76 98.3 2I5S
ASG PRO X 43 42 H AlphaHelix -60.66 -29.96 65.6 2I5S
ASG VAL X 44 43 H AlphaHelix -74.42 -49.61 0.0 2I5S
ASG LYS X 45 44 H AlphaHelix -54.83 -35.90 93.4 2I5S
ASG ALA X 46 45 H AlphaHelix -69.66 -16.42 56.2 2I5S
ASG ILE X 47 46 H AlphaHelix -48.08 -37.89 28.1 2I5S
ASG CYS X 48 47 T Turn -95.64 14.33 0.0 2I5S
ASG LYS X 49 48 T Turn -56.18 124.80 165.6 2I5S
ASG GLY X 50 49 T Turn 74.88 4.89 51.7 2I5S
ASG ILE X 51 50 T Turn -100.12 102.60 41.2 2I5S
ASG ILE X 52 51 C Coil -97.14 -61.18 105.6 2I5S
ASG ALA X 53 52 C Coil -61.72 143.30 81.0 2I5S
ASG SER X 54 53 C Coil -58.14 124.54 75.5 2I5S
ASG LYS X 55 54 E Strand -156.31 139.80 127.5 2I5S
ASG ASN X 56 55 E Strand -83.85 132.68 72.3 2I5S
ASG VAL X 57 56 E Strand -133.90 127.37 28.4 2I5S
ASG LEU X 58 57 E Strand -88.19 140.12 60.7 2I5S
ASG THR X 59 58 C Coil -61.11 147.16 3.4 2I5S
ASG THR X 60 59 C Coil -78.22 -27.69 130.7 2I5S
ASG SER X 61 60 C Coil -116.76 160.48 75.2 2I5S
ASG GLU X 62 61 C Coil -80.03 149.30 118.7 2I5S
ASG PHE X 63 62 E Strand -123.29 163.77 32.5 2I5S
ASG TYR X 64 63 E Strand -80.87 118.07 120.7 2I5S
ASG LEU X 65 64 E Strand -112.20 145.78 0.0 2I5S
ASG SER X 66 65 E Strand -123.55 119.22 0.0 2I5S
ASG ASP X 67 66 E Strand -102.66 132.44 10.4 2I5S
ASG CYS X 68 67 E Strand -94.20 111.20 0.0 2I5S
ASG ASN X 69 68 E Strand -113.85 128.78 49.8 2I5S
ASG VAL X 70 69 E Strand -69.09 140.43 41.5 2I5S
ASG THR X 71 70 T Turn -83.81 -170.64 41.8 2I5S
ASG SER X 72 71 T Turn -69.03 -11.90 128.3 2I5S
ASG ARG X 73 72 T Turn -98.54 111.34 192.3 2I5S
ASG PRO X 74 73 T Turn -45.69 132.13 117.2 2I5S
ASG CYS X 75 74 T Turn 63.67 21.27 19.5 2I5S
ASG LYS X 76 75 T Turn -122.91 133.79 99.6 2I5S
ASG TYR X 77 76 E Strand -125.86 157.31 21.0 2I5S
ASG LYS X 78 77 E Strand -107.23 140.47 145.0 2I5S
ASG LEU X 79 78 E Strand -90.98 119.01 58.8 2I5S
ASG LYS X 80 79 E Strand -109.90 117.41 125.3 2I5S
ASG LYS X 81 80 E Strand -97.74 133.81 89.4 2I5S
ASG SER X 82 81 E Strand -141.95 161.53 34.2 2I5S
ASG THR X 83 82 E Strand -115.31 118.77 72.9 2I5S
ASG ASN X 84 83 E Strand -161.78 162.71 53.5 2I5S
ASG LYS X 85 84 C Coil -73.86 164.31 75.2 2I5S
ASG PHE X 86 85 E Strand -149.64 163.87 0.0 2I5S
ASG CYS X 87 86 E Strand -114.20 143.81 0.0 2I5S
ASG VAL X 88 87 E Strand -134.17 160.63 0.2 2I5S
ASG THR X 89 88 E Strand -89.03 126.25 11.4 2I5S
ASG CYS X 90 89 E Strand -97.89 128.63 0.0 2I5S
ASG GLU X 91 90 E Strand -136.77 128.02 84.0 2I5S
ASG ASN X 92 91 T Turn 56.94 45.55 127.6 2I5S
ASG GLN X 93 92 T Turn 57.78 28.62 76.7 2I5S
ASG ALA X 94 93 E Strand -144.04 146.43 7.4 2I5S
ASG PRO X 95 94 E Strand -64.34 131.04 0.0 2I5S
ASG VAL X 96 95 E Strand -126.74 -2.82 31.6 2I5S
ASG HIS X 97 96 E Strand -167.39 134.29 102.3 2I5S
ASG PHE X 98 97 E Strand -89.84 121.61 23.8 2I5S
ASG VAL X 99 98 E Strand -89.44 -55.51 43.8 2I5S
ASG GLY X 100 99 E Strand -177.10 173.69 19.9 2I5S
ASG VAL X 101 100 E Strand -102.45 134.08 47.4 2I5S
ASG GLY X 102 101 T Turn 98.71 -30.81 31.1 2I5S
ASG SER X 103 102 T Turn -168.59 170.55 66.6 2I5S
ASG CYS X 104 103 C Coil -82.22 360.00 91.3 2I5S