Документ взят из кэша поисковой машины. Адрес оригинального документа : http://monkey.belozersky.msu.ru/npidb/pdb/pdb_new/stride/2mru.std.txt Дата изменения: Fri Oct 9 21:59:57 2015 Дата индексирования: Sun Apr 10 17:36:40 2016 Кодировка:

REM -------------------------------------------------------------------- 2MRU
REM 2MRU
REM STRIDE: Knowledge-based secondary structure assignment 2MRU
REM Please cite: D.Frishman & P.Argos, Proteins 23, 566-579, 1995 2MRU
REM 2MRU
REM Residue accessible surface area calculation 2MRU
REM Please cite: F.Eisenhaber & P.Argos, J.Comp.Chem. 14, 1272-1280, 1993 2MRU
REM F.Eisenhaber et al., J.Comp.Chem., 1994, submitted 2MRU
REM 2MRU
REM ------------------------ General information ----------------------- 2MRU
REM 2MRU
HDR DNA BINDING PROTEIN/DNA 15-JUL-14 2MRU 2MRU
CMP MOL_ID: 1; 2MRU
CMP MOLECULE: ANTITOXIN MAZE; 2MRU
CMP CHAIN: A, B; 2MRU
CMP FRAGMENT: DNA-BINDING DOMAIN (UNP RESIDUES 2-50); 2MRU
CMP ENGINEERED: YES; 2MRU
CMP MOL_ID: 2; 2MRU
CMP MOLECULE: DNA (5'-D(*CP*GP*TP*GP*AP*TP*AP*TP*AP*TP*AP*GP*TP* 2MRU
CMP 3'); 2MRU
CMP CHAIN: X; 2MRU
CMP ENGINEERED: YES; 2MRU
CMP MOL_ID: 3; 2MRU
CMP MOLECULE: DNA (5'-D(P*GP*CP*AP*CP*TP*AP*TP*AP*TP*AP*TP*CP*AP 2MRU
CMP 3'); 2MRU
CMP CHAIN: Y; 2MRU
CMP ENGINEERED: YES 2MRU
SRC MOL_ID: 1; 2MRU
SRC ORGANISM_SCIENTIFIC: ESCHERICHIA COLI K-12; 2MRU
SRC ORGANISM_TAXID: 83333; 2MRU
SRC GENE: B2783, BN896_2518, CHPAI, CHPR, JW2754, MAZE; 2MRU
SRC EXPRESSION_SYSTEM: ESCHERICHIA COLI; 2MRU
SRC EXPRESSION_SYSTEM_TAXID: 562; 2MRU
SRC EXPRESSION_SYSTEM_VECTOR_TYPE: VECTOR; 2MRU
SRC EXPRESSION_SYSTEM_VECTOR: PQE30-MAZE; 2MRU
SRC MOL_ID: 2; 2MRU
SRC SYNTHETIC: YES; 2MRU
SRC MOL_ID: 3; 2MRU
SRC SYNTHETIC: YES 2MRU
AUT V.ZORZINI,L.BUTS,R.LORIS,N.VAN NULAND 2MRU
REM 2MRU
REM -------------------- Secondary structure summary ------------------- 2MRU
REM 2MRU
CHN /data/npidb/pdb/pdb_new/all/pdb2mru.pdb A 2MRU
REM 2MRU
REM . . . . . 2MRU
SEQ 1 GIHSSVKRWGNSPAVRIPATLMQALNLNIDDEVKIDLVDGKLIIEPVRKE 50 2MRU
STR EEEEE EETTEEEEE HHHHHHH TTTEEEEEEEETTEEEEEE 2MRU
REM 2MRU
CHN /data/npidb/pdb/pdb_new/all/pdb2mru.pdb B 2MRU
REM 2MRU
REM . . . . . 2MRU
SEQ 1 GIHSSVKRWGNSPAVRIPATLMQALNLNIDDEVKIDLVDGKLIIEPVRKE 50 2MRU
STR EE EETTEEEEE HHHHHHH TTTEEEEEEEETTEEEEEEE 2MRU
REM 2MRU
REM 2MRU
REM 2MRU
LOC AlphaHelix ALA 19 A LEU 25 A 2MRU
LOC AlphaHelix ALA 19 B LEU 25 B 2MRU
LOC Strand ILE 2 A VAL 6 A 2MRU
LOC Strand ARG 8 A TRP 9 A 2MRU
LOC Strand SER 12 A ARG 16 A 2MRU
LOC Strand ASP 31 A VAL 38 A 2MRU
LOC Strand LYS 41 A PRO 46 A 2MRU
LOC Strand SER 5 B VAL 6 B 2MRU
LOC Strand ARG 8 B TRP 9 B 2MRU
LOC Strand SER 12 B ARG 16 B 2MRU
LOC Strand ASP 31 B VAL 38 B 2MRU
LOC Strand LYS 41 B VAL 47 B 2MRU
LOC TurnIV ARG 8 A ASN 11 A 2MRU
LOC TurnIV TRP 9 A SER 12 A 2MRU
LOC TurnII ASN 28 A ASP 31 A 2MRU
LOC TurnIV LEU 37 A GLY 40 A 2MRU
LOC TurnI' VAL 38 A LYS 41 A 2MRU
LOC TurnIV ARG 8 B ASN 11 B 2MRU
LOC TurnIV TRP 9 B SER 12 B 2MRU
LOC TurnII ASN 28 B ASP 31 B 2MRU
LOC TurnIV LEU 37 B GLY 40 B 2MRU
LOC TurnI' VAL 38 B LYS 41 B 2MRU
REM 2MRU
REM --------------- Detailed secondary structure assignment------------- 2MRU
REM 2MRU
REM |---Residue---| |--Structure--| |-Phi-| |-Psi-| |-Area-| 2MRU
ASG GLY A 1 1 C Coil 360.00 -136.04 69.1 2MRU
ASG ILE A 2 2 E Strand -120.30 123.64 79.8 2MRU
ASG HIS A 3 3 E Strand -87.00 130.74 127.1 2MRU
ASG SER A 4 4 E Strand -122.72 146.29 12.6 2MRU
ASG SER A 5 5 E Strand -88.47 115.09 37.8 2MRU
ASG VAL A 6 6 E Strand -74.65 91.11 1.2 2MRU
ASG LYS A 7 7 C Coil -81.86 -179.44 74.6 2MRU
ASG ARG A 8 8 E Strand -101.11 108.04 140.7 2MRU
ASG TRP A 9 9 E Strand -83.60 87.75 51.8 2MRU
ASG GLY A 10 10 T Turn 78.63 -92.76 56.7 2MRU
ASG ASN A 11 11 T Turn -126.43 -11.60 121.6 2MRU
ASG SER A 12 12 E Strand -112.92 142.73 58.3 2MRU
ASG PRO A 13 13 E Strand -74.50 149.56 4.8 2MRU
ASG ALA A 14 14 E Strand -144.02 133.21 0.0 2MRU
ASG VAL A 15 15 E Strand -82.95 108.08 3.0 2MRU
ASG ARG A 16 16 E Strand -65.31 121.88 84.5 2MRU
ASG ILE A 17 17 C Coil -109.08 105.28 3.8 2MRU
ASG PRO A 18 18 C Coil -55.37 145.42 38.6 2MRU
ASG ALA A 19 19 H AlphaHelix -58.15 -26.92 40.6 2MRU
ASG THR A 20 20 H AlphaHelix -60.86 -37.16 106.1 2MRU
ASG LEU A 21 21 H AlphaHelix -76.81 -31.20 15.7 2MRU
ASG MET A 22 22 H AlphaHelix -60.89 -48.36 21.4 2MRU
ASG GLN A 23 23 H AlphaHelix -65.54 -32.44 146.6 2MRU
ASG ALA A 24 24 H AlphaHelix -59.01 -56.56 68.4 2MRU
ASG LEU A 25 25 H AlphaHelix -87.89 1.67 48.9 2MRU
ASG ASN A 26 26 C Coil 62.45 44.07 115.4 2MRU
ASG LEU A 27 27 C Coil -110.58 161.79 15.4 2MRU
ASG ASN A 28 28 T Turn -137.95 -172.25 100.5 2MRU
ASG ILE A 29 29 T Turn -75.58 154.27 47.1 2MRU
ASG ASP A 30 30 T Turn 67.44 29.14 99.0 2MRU
ASG ASP A 31 31 E Strand -100.59 172.71 41.6 2MRU
ASG GLU A 32 32 E Strand -113.54 126.45 51.7 2MRU
ASG VAL A 33 33 E Strand -119.52 139.90 18.8 2MRU
ASG LYS A 34 34 E Strand -85.07 107.50 98.7 2MRU
ASG ILE A 35 35 E Strand -83.64 96.41 61.9 2MRU
ASG ASP A 36 36 E Strand -101.21 159.05 67.2 2MRU
ASG LEU A 37 37 E Strand -115.78 93.72 87.3 2MRU
ASG VAL A 38 38 E Strand -125.90 133.66 71.9 2MRU
ASG ASP A 39 39 T Turn 64.25 23.56 130.8 2MRU
ASG GLY A 40 40 T Turn 71.21 17.97 48.0 2MRU
ASG LYS A 41 41 E Strand -123.53 168.24 50.5 2MRU
ASG LEU A 42 42 E Strand -90.88 114.26 4.2 2MRU
ASG ILE A 43 43 E Strand -92.60 106.30 11.6 2MRU
ASG ILE A 44 44 E Strand -105.28 108.14 3.4 2MRU
ASG GLU A 45 45 E Strand -125.62 128.50 32.1 2MRU
ASG PRO A 46 46 E Strand -72.10 116.18 47.6 2MRU
ASG VAL A 47 47 C Coil -112.90 86.90 56.1 2MRU
ASG ARG A 48 48 C Coil -59.17 142.47 145.6 2MRU
ASG LYS A 49 49 C Coil -100.74 68.54 141.3 2MRU
ASG GLU A 50 50 C Coil -120.28 360.00 213.0 2MRU
ASG GLY B 1 1 C Coil 360.00 -149.13 128.9 2MRU
ASG ILE B 2 2 C Coil -72.07 134.57 130.8 2MRU
ASG HIS B 3 3 C Coil -81.95 57.70 154.0 2MRU
ASG SER B 4 4 C Coil -74.26 151.17 44.4 2MRU
ASG SER B 5 5 E Strand -120.12 150.29 48.6 2MRU
ASG VAL B 6 6 E Strand -90.14 114.12 9.4 2MRU
ASG LYS B 7 7 C Coil -100.75 174.37 78.0 2MRU
ASG ARG B 8 8 E Strand -87.98 133.78 148.7 2MRU
ASG TRP B 9 9 E Strand -106.92 83.71 64.7 2MRU
ASG GLY B 10 10 T Turn 78.44 -71.26 62.2 2MRU
ASG ASN B 11 11 T Turn -132.85 -50.68 131.6 2MRU
ASG SER B 12 12 E Strand -95.00 148.79 35.6 2MRU
ASG PRO B 13 13 E Strand -73.38 159.57 1.6 2MRU
ASG ALA B 14 14 E Strand -146.27 133.63 0.0 2MRU
ASG VAL B 15 15 E Strand -81.71 107.04 5.2 2MRU
ASG ARG B 16 16 E Strand -68.57 114.99 103.7 2MRU
ASG ILE B 17 17 C Coil -104.61 122.14 1.8 2MRU
ASG PRO B 18 18 C Coil -51.22 127.06 36.6 2MRU
ASG ALA B 19 19 H AlphaHelix -56.45 -29.66 43.1 2MRU
ASG THR B 20 20 H AlphaHelix -65.81 -33.24 107.2 2MRU
ASG LEU B 21 21 H AlphaHelix -81.12 -30.12 72.8 2MRU
ASG MET B 22 22 H AlphaHelix -60.63 -35.92 10.2 2MRU
ASG GLN B 23 23 H AlphaHelix -70.65 -27.97 147.6 2MRU
ASG ALA B 24 24 H AlphaHelix -71.87 -37.27 76.8 2MRU
ASG LEU B 25 25 H AlphaHelix -83.32 -7.78 33.6 2MRU
ASG ASN B 26 26 C Coil 63.72 56.52 122.1 2MRU
ASG LEU B 27 27 C Coil -138.93 170.50 17.1 2MRU
ASG ASN B 28 28 T Turn -139.94 -164.14 116.9 2MRU
ASG ILE B 29 29 T Turn -74.53 146.40 54.4 2MRU
ASG ASP B 30 30 T Turn 78.29 9.93 87.4 2MRU
ASG ASP B 31 31 E Strand -71.15 143.47 32.7 2MRU
ASG GLU B 32 32 E Strand -98.32 99.12 54.7 2MRU
ASG VAL B 33 33 E Strand -89.32 134.09 1.2 2MRU
ASG LYS B 34 34 E Strand -89.87 109.77 71.8 2MRU
ASG ILE B 35 35 E Strand -86.85 106.55 1.0 2MRU
ASG ASP B 36 36 E Strand -117.43 140.49 56.9 2MRU
ASG LEU B 37 37 E Strand -83.44 106.48 79.8 2MRU
ASG VAL B 38 38 E Strand -133.64 130.68 58.7 2MRU
ASG ASP B 39 39 T Turn 59.09 24.22 148.1 2MRU
ASG GLY B 40 40 T Turn 73.02 18.89 53.8 2MRU
ASG LYS B 41 41 E Strand -130.92 166.89 55.5 2MRU
ASG LEU B 42 42 E Strand -90.31 108.04 4.8 2MRU
ASG ILE B 43 43 E Strand -89.59 105.52 17.8 2MRU
ASG ILE B 44 44 E Strand -97.05 100.21 0.4 2MRU
ASG GLU B 45 45 E Strand -112.99 119.96 36.1 2MRU
ASG PRO B 46 46 E Strand -66.30 121.24 40.9 2MRU
ASG VAL B 47 47 E Strand -105.76 108.00 54.3 2MRU
ASG ARG B 48 48 C Coil -69.57 145.48 154.8 2MRU
ASG LYS B 49 49 C Coil -104.22 81.83 143.9 2MRU
ASG GLU B 50 50 C Coil -109.11 360.00 214.2 2MRU