Документ взят из кэша поисковой машины. Адрес оригинального документа : http://monkey.belozersky.msu.ru/npidb/pdb/pdb_new/stride/2mkn.std.txt Дата изменения: Wed Apr 2 18:12:40 2014 Дата индексирования: Sun Apr 10 17:36:32 2016 Кодировка:

REM -------------------------------------------------------------------- 2MKN
REM 2MKN
REM STRIDE: Knowledge-based secondary structure assignment 2MKN
REM Please cite: D.Frishman & P.Argos, Proteins 23, 566-579, 1995 2MKN
REM 2MKN
REM Residue accessible surface area calculation 2MKN
REM Please cite: F.Eisenhaber & P.Argos, J.Comp.Chem. 14, 1272-1280, 1993 2MKN
REM F.Eisenhaber et al., J.Comp.Chem., 1994, submitted 2MKN
REM 2MKN
REM ------------------------ General information ----------------------- 2MKN
REM 2MKN
HDR RNA BINDING PROTEIN/RNA 10-FEB-14 2MKN 2MKN
CMP MOL_ID: 1; 2MKN
CMP MOLECULE: ZINC FINGER PROTEIN 346; 2MKN
CMP CHAIN: A; 2MKN
CMP FRAGMENT: UNP RESIDUES 181-224; 2MKN
CMP ENGINEERED: YES; 2MKN
CMP MOL_ID: 2; 2MKN
CMP MOLECULE: RNA (5'- 2MKN
CMP R(*GP*CP*CP*GP*UP*GP*GP*UP*CP*UP*GP*GP*UP*GP*GP*CP*CP*GP*G)- 2MKN
CMP CHAIN: B; 2MKN
CMP ENGINEERED: YES; 2MKN
CMP MOL_ID: 3; 2MKN
CMP MOLECULE: RNA (5'- 2MKN
CMP R(P*CP*CP*GP*GP*CP*CP*AP*CP*CP*AP*GP*AP*CP*CP*AP*CP*GP*GP*C) 2MKN
CMP CHAIN: C; 2MKN
CMP ENGINEERED: YES 2MKN
SRC MOL_ID: 1; 2MKN
SRC ORGANISM_SCIENTIFIC: HOMO SAPIENS; 2MKN
SRC ORGANISM_COMMON: HUMAN; 2MKN
SRC ORGANISM_TAXID: 9606; 2MKN
SRC GENE: ZNF346, JAZ; 2MKN
SRC EXPRESSION_SYSTEM: ESCHERICHIA COLI; 2MKN
SRC EXPRESSION_SYSTEM_TAXID: 562; 2MKN
SRC EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; 2MKN
SRC EXPRESSION_SYSTEM_PLASMID: PET21A; 2MKN
SRC MOL_ID: 2; 2MKN
SRC SYNTHETIC: YES; 2MKN
SRC MOL_ID: 3; 2MKN
SRC SYNTHETIC: YES 2MKN
AUT P.WRIGHT,J.DYSON,R.BURGE,M.MARTINEZ-YAMOUT 2MKN
REM 2MKN
REM -------------------- Secondary structure summary ------------------- 2MKN
REM 2MKN
CHN /data/npidb/pdb/pdb_new/all/pdb2mkn.pdb A 2MKN
REM 2MKN
REM . . . . 2MKN
SEQ 1 IDPDKFCSLCHATFNDPVMAQQHYVGKKHRKQETKLKLMARYGR 44 2MKN
STR EEETTTTEEE HHHHHHHHH HHHHHHHHHHHHHHHH 2MKN
REM 2MKN
REM 2MKN
REM 2MKN
LOC AlphaHelix PRO 197 A VAL 205 A 2MKN
LOC AlphaHelix LYS 207 A TYR 222 A 2MKN
LOC Strand LYS 185 A CYS 187 A 2MKN
LOC Strand ALA 192 A PHE 194 A 2MKN
LOC TurnI CYS 187 A CYS 190 A 2MKN
LOC TurnI SER 188 A HIS 191 A 2MKN
REM 2MKN
REM --------------- Detailed secondary structure assignment------------- 2MKN
REM 2MKN
REM |---Residue---| |--Structure--| |-Phi-| |-Psi-| |-Area-| 2MKN
ASG ILE A 181 1 C Coil 360.00 130.77 173.7 2MKN
ASG ASP A 182 2 C Coil -112.93 99.79 99.5 2MKN
ASG PRO A 183 3 C Coil -95.77 121.24 55.0 2MKN
ASG ASP A 184 4 C Coil -61.66 131.58 111.9 2MKN
ASG LYS A 185 5 E Strand -136.96 165.14 102.3 2MKN
ASG PHE A 186 6 E Strand -141.76 134.05 88.9 2MKN
ASG CYS A 187 7 E Strand -100.54 84.04 1.5 2MKN
ASG SER A 188 8 T Turn -53.18 -31.34 92.0 2MKN
ASG LEU A 189 9 T Turn -74.89 -13.70 65.8 2MKN
ASG CYS A 190 10 T Turn -130.09 -3.33 24.3 2MKN
ASG HIS A 191 11 T Turn 62.73 30.00 157.7 2MKN
ASG ALA A 192 12 E Strand -110.66 140.89 33.3 2MKN
ASG THR A 193 13 E Strand -101.71 147.05 91.8 2MKN
ASG PHE A 194 14 E Strand -119.62 148.15 8.4 2MKN
ASG ASN A 195 15 C Coil -123.17 -43.27 87.6 2MKN
ASG ASP A 196 16 C Coil -83.79 150.63 86.4 2MKN
ASG PRO A 197 17 H AlphaHelix -60.23 -52.92 54.6 2MKN
ASG VAL A 198 18 H AlphaHelix -72.24 -20.50 93.2 2MKN
ASG MET A 199 19 H AlphaHelix -61.00 -34.97 81.7 2MKN
ASG ALA A 200 20 H AlphaHelix -80.80 -58.75 5.2 2MKN
ASG GLN A 201 21 H AlphaHelix -51.18 -46.29 117.9 2MKN
ASG GLN A 202 22 H AlphaHelix -58.87 -40.20 130.9 2MKN
ASG HIS A 203 23 H AlphaHelix -74.75 -35.19 33.1 2MKN
ASG TYR A 204 24 H AlphaHelix -62.10 -32.75 76.2 2MKN
ASG VAL A 205 25 H AlphaHelix -102.43 19.53 105.5 2MKN
ASG GLY A 206 26 C Coil -92.28 171.03 21.6 2MKN
ASG LYS A 207 27 H AlphaHelix -74.39 -49.34 173.6 2MKN
ASG LYS A 208 28 H AlphaHelix -75.46 65.78 145.0 2MKN
ASG HIS A 209 29 H AlphaHelix 179.80 -48.77 10.6 2MKN
ASG ARG A 210 30 H AlphaHelix -67.31 -44.37 160.2 2MKN
ASG LYS A 211 31 H AlphaHelix -80.03 -22.49 145.2 2MKN
ASG GLN A 212 32 H AlphaHelix -66.41 -44.71 76.3 2MKN
ASG GLU A 213 33 H AlphaHelix -61.72 -31.99 60.5 2MKN
ASG THR A 214 34 H AlphaHelix -61.38 -47.73 68.4 2MKN
ASG LYS A 215 35 H AlphaHelix -73.10 -36.68 150.4 2MKN
ASG LEU A 216 36 H AlphaHelix -67.56 -46.94 83.3 2MKN
ASG LYS A 217 37 H AlphaHelix -61.77 -41.32 101.8 2MKN
ASG LEU A 218 38 H AlphaHelix -60.99 -45.84 106.8 2MKN
ASG MET A 219 39 H AlphaHelix -61.10 -44.32 134.1 2MKN
ASG ALA A 220 40 H AlphaHelix -69.13 -43.14 74.7 2MKN
ASG ARG A 221 41 H AlphaHelix -69.17 -35.62 208.0 2MKN
ASG TYR A 222 42 H AlphaHelix -83.24 -15.41 191.6 2MKN
ASG GLY A 223 43 C Coil -82.16 60.70 55.1 2MKN
ASG ARG A 224 44 C Coil -152.08 360.00 275.4 2MKN