Документ взят из кэша поисковой машины. Адрес оригинального документа : http://monkey.belozersky.msu.ru/npidb/pdb/pdb_new/stride/1xok.std.txt Дата изменения: Thu Oct 4 11:30:33 2012 Дата индексирования: Sun Feb 3 21:15:14 2013 Кодировка:

REM -------------------------------------------------------------------- 1XOK
REM 1XOK
REM STRIDE: Knowledge-based secondary structure assignment 1XOK
REM Please cite: D.Frishman & P.Argos, Proteins 23, 566-579, 1995 1XOK
REM 1XOK
REM Residue accessible surface area calculation 1XOK
REM Please cite: F.Eisenhaber & P.Argos, J.Comp.Chem. 14, 1272-1280, 1993 1XOK
REM F.Eisenhaber et al., J.Comp.Chem., 1994, submitted 1XOK
REM 1XOK
REM ------------------------ General information ----------------------- 1XOK
REM 1XOK
HDR VIRAL PROTEIN/RNA 06-OCT-04 1XOK 1XOK
CMP MOL_ID: 1; 1XOK
CMP MOLECULE: ALFALFA MOSAIC VIRUS RNA 3' UTR; 1XOK
CMP CHAIN: A; 1XOK
CMP FRAGMENT: AMV RNA BASES 843-872; 1XOK
CMP ENGINEERED: YES; 1XOK
CMP MOL_ID: 2; 1XOK
CMP MOLECULE: ALFALFA MOSAIC VIRUS RNA 3' UTR; 1XOK
CMP CHAIN: B; 1XOK
CMP FRAGMENT: AMV RNA BASES 873-881; 1XOK
CMP ENGINEERED: YES; 1XOK
CMP MOL_ID: 3; 1XOK
CMP MOLECULE: COAT PROTEIN; 1XOK
CMP CHAIN: C, D; 1XOK
CMP FRAGMENT: AMV COAT PROTEIN RESIDUES 1-26; 1XOK
CMP ENGINEERED: YES 1XOK
SRC MOL_ID: 1; 1XOK
SRC SYNTHETIC: YES; 1XOK
SRC OTHER_DETAILS: RNA SYNTHESIS DHARMACON RESEARCH; 1XOK
SRC MOL_ID: 2; 1XOK
SRC SYNTHETIC: YES; 1XOK
SRC OTHER_DETAILS: RNA SYNTHESIS DHARMACON RESEARCH; 1XOK
SRC MOL_ID: 3; 1XOK
SRC SYNTHETIC: YES; 1XOK
SRC OTHER_DETAILS: PEPTIDE SYNTHESIS BY MIT BIOPOLYMERS LABORATO 1XOK
AUT L.M.GUOGAS,D.J.FILMAN,J.M.HOGLE,L.GEHRKE 1XOK
REM 1XOK
REM -------------------- Secondary structure summary ------------------- 1XOK
REM 1XOK
CHN /data/npidb/pdb/pdb_new/all/pdb1xok.pdb C 1XOK
REM 1XOK
REM . 1XOK
SEQ 1 GKPTKRSQNYAALRK 15 1XOK
STR HHHHHHHHHH 1XOK
REM 1XOK
CHN /data/npidb/pdb/pdb_new/all/pdb1xok.pdb D 1XOK
REM 1XOK
REM . 1XOK
SEQ 1 GKAGKPTKRSQNYAALRK 18 1XOK
STR HHHHHHHHH 1XOK
REM 1XOK
REM 1XOK
REM 1XOK
LOC AlphaHelix LYS 16 C ARG 25 C 1XOK
LOC AlphaHelix LYS 16 D LEU 24 D 1XOK
REM 1XOK
REM --------------- Detailed secondary structure assignment------------- 1XOK
REM 1XOK
REM |---Residue---| |--Structure--| |-Phi-| |-Psi-| |-Area-| 1XOK
ASG GLY C 12 1 C Coil 360.00 -93.39 139.7 1XOK
ASG LYS C 13 2 C Coil -102.12 154.05 79.3 1XOK
ASG PRO C 14 3 C Coil -60.98 152.68 88.8 1XOK
ASG THR C 15 4 C Coil -136.32 163.47 57.2 1XOK
ASG LYS C 16 5 H AlphaHelix -49.54 -52.20 170.3 1XOK
ASG ARG C 17 6 H AlphaHelix -56.40 -52.35 214.9 1XOK
ASG SER C 18 7 H AlphaHelix -67.43 -38.98 52.8 1XOK
ASG GLN C 19 8 H AlphaHelix -63.66 -48.09 104.3 1XOK
ASG ASN C 20 9 H AlphaHelix -58.34 -40.40 102.0 1XOK
ASG TYR C 21 10 H AlphaHelix -62.76 -50.09 122.5 1XOK
ASG ALA C 22 11 H AlphaHelix -53.06 -37.93 39.8 1XOK
ASG ALA C 23 12 H AlphaHelix -65.18 -70.22 54.9 1XOK
ASG LEU C 24 13 H AlphaHelix -51.14 -33.83 150.6 1XOK
ASG ARG C 25 14 H AlphaHelix -71.89 -27.77 137.6 1XOK
ASG LYS C 26 15 C Coil -75.92 360.00 236.5 1XOK
ASG GLY D 9 1 C Coil 360.00 27.89 99.7 1XOK
ASG LYS D 10 2 C Coil -133.87 161.65 83.6 1XOK
ASG ALA D 11 3 C Coil -106.55 -68.14 104.4 1XOK
ASG GLY D 12 4 C Coil 87.77 116.06 70.9 1XOK
ASG LYS D 13 5 C Coil -91.25 127.00 193.4 1XOK
ASG PRO D 14 6 C Coil -66.08 133.77 86.5 1XOK
ASG THR D 15 7 C Coil -108.22 -170.88 66.1 1XOK
ASG LYS D 16 8 H AlphaHelix -70.62 -36.00 84.0 1XOK
ASG ARG D 17 9 H AlphaHelix -73.90 -52.92 200.4 1XOK
ASG SER D 18 10 H AlphaHelix -50.29 -53.51 54.0 1XOK
ASG GLN D 19 11 H AlphaHelix -60.40 -44.88 114.9 1XOK
ASG ASN D 20 12 H AlphaHelix -58.22 -45.15 94.8 1XOK
ASG TYR D 21 13 H AlphaHelix -56.96 -53.82 149.1 1XOK
ASG ALA D 22 14 H AlphaHelix -57.83 -38.25 60.6 1XOK
ASG ALA D 23 15 H AlphaHelix -58.63 -43.52 82.1 1XOK
ASG LEU D 24 16 H AlphaHelix -75.18 -20.62 134.4 1XOK
ASG ARG D 25 17 C Coil -66.27 114.69 169.1 1XOK
ASG LYS D 26 18 C Coil -82.85 360.00 160.9 1XOK