Документ взят из кэша поисковой машины. Адрес оригинального документа : http://monkey.belozersky.msu.ru/npidb/pdb/pdb_new/stride/1gcc.std.txt Дата изменения: Tue Jan 18 15:09:42 2011 Дата индексирования: Fri Feb 11 17:46:45 2011 Кодировка:

REM -------------------------------------------------------------------- 1GCC
REM 1GCC
REM STRIDE: Knowledge-based secondary structure assignment 1GCC
REM Please cite: D.Frishman & P.Argos, Proteins 23, 566-579, 1995 1GCC
REM 1GCC
REM Residue accessible surface area calculation 1GCC
REM Please cite: F.Eisenhaber & P.Argos, J.Comp.Chem. 14, 1272-1280, 1993 1GCC
REM F.Eisenhaber et al., J.Comp.Chem., 1994, submitted 1GCC
REM 1GCC
REM ------------------------ General information ----------------------- 1GCC
REM 1GCC
HDR TRANSCRIPTION/DNA 13-MAR-98 1GCC 1GCC
CMP MOL_ID: 1; 1GCC
CMP MOLECULE: DNA (5'-D(*TP*AP*GP*CP*CP*GP*CP*CP*AP*GP*C)-3'); 1GCC
CMP CHAIN: B; 1GCC
CMP ENGINEERED: YES; 1GCC
CMP MOL_ID: 2; 1GCC
CMP MOLECULE: DNA (5'-D(*GP*CP*TP*GP*GP*CP*GP*GP*CP*TP*A)-3'); 1GCC
CMP CHAIN: C; 1GCC
CMP ENGINEERED: YES; 1GCC
CMP MOL_ID: 3; 1GCC
CMP MOLECULE: ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1; 1GCC
CMP CHAIN: A; 1GCC
CMP FRAGMENT: GCC-BOX BINDING DOMAIN; 1GCC
CMP ENGINEERED: YES 1GCC
SRC MOL_ID: 1; 1GCC
SRC SYNTHETIC: YES; 1GCC
SRC MOL_ID: 2; 1GCC
SRC SYNTHETIC: YES; 1GCC
SRC MOL_ID: 3; 1GCC
SRC ORGANISM_SCIENTIFIC: ARABIDOPSIS THALIANA; 1GCC
SRC ORGANISM_COMMON: THALE CRESS; 1GCC
SRC ORGANISM_TAXID: 3702; 1GCC
SRC CELL_LINE: BL21; 1GCC
SRC GENE: ATERF1; 1GCC
SRC EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); 1GCC
SRC EXPRESSION_SYSTEM_TAXID: 469008; 1GCC
SRC EXPRESSION_SYSTEM_STRAIN: BL21 (DE3); 1GCC
SRC EXPRESSION_SYSTEM_PLASMID: PAF104; 1GCC
SRC OTHER_DETAILS: DNA-BINDING DOMAIN OF ATERF1; 1GCC
AUT K.YAMASAKI,M.D.ALLEN,M.OHME-TAKAGI,M.TATENO,M.SUZUKI 1GCC
REM 1GCC
REM -------------------- Secondary structure summary ------------------- 1GCC
REM 1GCC
CHN /data/npidb/pdb/pdb_new/all/pdb1gcc.pdb A 1GCC
REM 1GCC
REM . . . . . 1GCC
SEQ 1 KHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDRAAFRM 50 1GCC
STR BTTEEEETTTEEEEEEEETTTTTEEEEEEEE HHHHHHHHHHHHHHH 1GCC
REM 1GCC
REM . 1GCC
SEQ 51 RGSRALLNFPLRV 63 1GCC
STR HTTT TTTT 1GCC
REM 1GCC
REM 1GCC
REM 1GCC
LOC AlphaHelix ALA 179 A ARG 194 A 1GCC
LOC Strand VAL 149 A ARG 152 A 1GCC
LOC Strand LYS 156 A ASP 163 A 1GCC
LOC Strand ALA 169 A PHE 176 A 1GCC
LOC TurnII TYR 146 A VAL 149 A 1GCC
LOC TurnI ARG 152 A GLY 155 A 1GCC
LOC TurnI ASP 163 A LYS 166 A 1GCC
LOC TurnI PRO 164 A ASN 167 A 1GCC
LOC TurnI' LYS 166 A ALA 169 A 1GCC
LOC TurnIV ARG 194 A ARG 197 A 1GCC
LOC TurnIV LEU 200 A PRO 203 A 1GCC
REM 1GCC
REM --------------- Detailed secondary structure assignment------------- 1GCC
REM 1GCC
REM |---Residue---| |--Structure--| |-Phi-| |-Psi-| |-Area-| 1GCC
ASG LYS A 144 1 C Coil 360.00 154.94 211.1 1GCC
ASG HIS A 145 2 C Coil -104.60 171.38 166.2 1GCC
ASG TYR A 146 3 B Bridge -149.65 162.90 40.2 1GCC
ASG ARG A 147 4 T Turn -69.75 126.95 99.7 1GCC
ASG GLY A 148 5 T Turn 79.61 -19.00 23.2 1GCC
ASG VAL A 149 6 E Strand -95.32 129.29 18.8 1GCC
ASG ARG A 150 7 E Strand -135.49 109.14 94.5 1GCC
ASG GLN A 151 8 E Strand -58.71 126.30 131.3 1GCC
ASG ARG A 152 9 E Strand -93.95 137.26 77.2 1GCC
ASG PRO A 153 10 T Turn -65.03 -20.30 103.2 1GCC
ASG TRP A 154 11 T Turn -75.36 -4.15 195.4 1GCC
ASG GLY A 155 12 T Turn 102.15 38.77 49.2 1GCC
ASG LYS A 156 13 E Strand -124.84 170.80 56.1 1GCC
ASG PHE A 157 14 E Strand -127.53 110.31 41.3 1GCC
ASG ALA A 158 15 E Strand -77.40 163.42 0.0 1GCC
ASG ALA A 159 16 E Strand -140.36 122.91 0.0 1GCC
ASG GLU A 160 17 E Strand -112.24 159.33 35.7 1GCC
ASG ILE A 161 18 E Strand -132.47 149.40 8.9 1GCC
ASG ARG A 162 19 E Strand -93.14 129.66 164.5 1GCC
ASG ASP A 163 20 E Strand -104.70 109.83 8.4 1GCC
ASG PRO A 164 21 T Turn -76.05 -23.16 102.2 1GCC
ASG ALA A 165 22 T Turn -67.20 -35.03 97.8 1GCC
ASG LYS A 166 23 T Turn -82.96 19.59 133.5 1GCC
ASG ASN A 167 24 T Turn 54.19 56.67 154.4 1GCC
ASG GLY A 168 25 T Turn 79.17 18.24 27.4 1GCC
ASG ALA A 169 26 E Strand -61.85 140.90 34.8 1GCC
ASG ARG A 170 27 E Strand -74.77 152.86 170.5 1GCC
ASG VAL A 171 28 E Strand -141.96 98.77 51.3 1GCC
ASG TRP A 172 29 E Strand -79.39 104.65 117.1 1GCC
ASG LEU A 173 30 E Strand -71.68 -15.21 49.2 1GCC
ASG GLY A 174 31 E Strand 123.78 -157.05 21.1 1GCC
ASG THR A 175 32 E Strand -132.88 149.99 72.8 1GCC
ASG PHE A 176 33 E Strand -145.94 137.94 36.4 1GCC
ASG GLU A 177 34 C Coil -61.38 -36.55 139.0 1GCC
ASG THR A 178 35 C Coil -114.26 152.99 65.9 1GCC
ASG ALA A 179 36 H AlphaHelix -66.65 -35.78 7.0 1GCC
ASG GLU A 180 37 H AlphaHelix -70.91 -21.59 102.4 1GCC
ASG ASP A 181 38 H AlphaHelix -91.26 -33.34 75.8 1GCC
ASG ALA A 182 39 H AlphaHelix -60.27 -44.54 0.0 1GCC
ASG ALA A 183 40 H AlphaHelix -72.82 -33.01 0.0 1GCC
ASG LEU A 184 41 H AlphaHelix -72.14 -26.55 56.1 1GCC
ASG ALA A 185 42 H AlphaHelix -67.42 -45.88 20.1 1GCC
ASG TYR A 186 43 H AlphaHelix -56.91 -39.94 21.8 1GCC
ASG ASP A 187 44 H AlphaHelix -50.54 -51.24 15.0 1GCC
ASG ARG A 188 45 H AlphaHelix -76.08 -34.31 167.6 1GCC
ASG ALA A 189 46 H AlphaHelix -65.93 -46.19 18.0 1GCC
ASG ALA A 190 47 H AlphaHelix -60.16 -42.05 0.6 1GCC
ASG PHE A 191 48 H AlphaHelix -61.98 -34.97 85.8 1GCC
ASG ARG A 192 49 H AlphaHelix -73.05 -44.23 223.7 1GCC
ASG MET A 193 50 H AlphaHelix -72.83 -28.14 64.8 1GCC
ASG ARG A 194 51 H AlphaHelix -90.76 -25.21 156.2 1GCC
ASG GLY A 195 52 T Turn 79.95 -35.76 53.0 1GCC
ASG SER A 196 53 T Turn -171.33 178.85 66.8 1GCC
ASG ARG A 197 54 T Turn 51.83 74.04 227.1 1GCC
ASG ALA A 198 55 C Coil -129.98 156.87 31.3 1GCC
ASG LEU A 199 56 C Coil -105.59 109.86 114.8 1GCC
ASG LEU A 200 57 T Turn -126.28 177.61 23.5 1GCC
ASG ASN A 201 58 T Turn -90.04 -38.68 24.2 1GCC
ASG PHE A 202 59 T Turn -129.58 76.13 65.9 1GCC
ASG PRO A 203 60 T Turn -63.05 104.57 59.9 1GCC
ASG LEU A 204 61 C Coil -73.32 3.75 161.3 1GCC
ASG ARG A 205 62 C Coil -82.69 -6.24 242.3 1GCC
ASG VAL A 206 63 C Coil -127.23 360.00 176.4 1GCC