Документ взят из кэша поисковой машины. Адрес оригинального документа : http://monkey.belozersky.msu.ru/npidb/pdb/pdb_new/stride/3zhm.std.txt Дата изменения: Mon Jan 13 18:59:20 2014 Дата индексирования: Fri Feb 28 20:39:43 2014 Кодировка:

REM -------------------------------------------------------------------- 3ZHM
REM 3ZHM
REM STRIDE: Knowledge-based secondary structure assignment 3ZHM
REM Please cite: D.Frishman & P.Argos, Proteins 23, 566-579, 1995 3ZHM
REM 3ZHM
REM Residue accessible surface area calculation 3ZHM
REM Please cite: F.Eisenhaber & P.Argos, J.Comp.Chem. 14, 1272-1280, 1993 3ZHM
REM F.Eisenhaber et al., J.Comp.Chem., 1994, submitted 3ZHM
REM 3ZHM
REM ------------------------ General information ----------------------- 3ZHM
REM 3ZHM
HDR TRANSCRIPTION 22-DEC-12 3ZHM 3ZHM
CMP MOL_ID: 1; 3ZHM
CMP MOLECULE: CI; 3ZHM
CMP CHAIN: A; 3ZHM
CMP FRAGMENT: RESIDUES 2-74; 3ZHM
CMP SYNONYM: CI REPRESSOR; 3ZHM
CMP ENGINEERED: YES; 3ZHM
CMP MOL_ID: 2; 3ZHM
CMP MOLECULE: 5'-D(*AP*GP*TP*TP*CP*AP*CP*GP*TP*TP*CP*AP*AP*GP 3ZHM
CMP *TP*GP*CP*A)-3'; 3ZHM
CMP CHAIN: B; 3ZHM
CMP SYNONYM: OL2 OPERATOR HALF-SITE; 3ZHM
CMP MOL_ID: 3; 3ZHM
CMP MOLECULE: 5'-D(*AP*CP*GP*TP*GP*AP*AP*CP*TP*TP*GP*CP*AP*CP 3ZHM
CMP *TP*TP*GP*A)-3'; 3ZHM
CMP CHAIN: C; 3ZHM
CMP SYNONYM: OL2 OPERATOR HALF-SITE 3ZHM
SRC MOL_ID: 1; 3ZHM
SRC ORGANISM_SCIENTIFIC: LACTOCOCCUS PHAGE TP901-1; 3ZHM
SRC ORGANISM_TAXID: 35345; 3ZHM
SRC EXPRESSION_SYSTEM: ESCHERICHIA COLI; 3ZHM
SRC EXPRESSION_SYSTEM_TAXID: 562; 3ZHM
SRC EXPRESSION_SYSTEM_STRAIN: M15; 3ZHM
SRC EXPRESSION_SYSTEM_PLASMID: PQE-70; 3ZHM
SRC MOL_ID: 2; 3ZHM
SRC SYNTHETIC: YES; 3ZHM
SRC ORGANISM_SCIENTIFIC: LACTOCOCCUS PHAGE TP901-1; 3ZHM
SRC ORGANISM_TAXID: 35345; 3ZHM
SRC MOL_ID: 3; 3ZHM
SRC SYNTHETIC: YES; 3ZHM
SRC ORGANISM_SCIENTIFIC: LACTOCOCCUS PHAGE TP901-1; 3ZHM
SRC ORGANISM_TAXID: 35345 3ZHM
AUT K.H.FRANDSEN,K.K.RASMUSSEN,J.N.POULSEN,L.LO LEGGIO 3ZHM
REM 3ZHM
REM -------------------- Secondary structure summary ------------------- 3ZHM
REM 3ZHM
CHN /data/npidb/pdb/pdb_new/all/pdb3zhm.pdb A 3ZHM
REM 3ZHM
REM . . . . . 3ZHM
SEQ 1 KTDTSNRLKQIMAERNLKQVDILNLSIPFQKKFGIKLSKSTLSQYVNSVQ 50 3ZHM
STR HHHHHHHHHHHHH HHHHHHHHHHHHHHH HHHHHHHHHTTT 3ZHM
REM 3ZHM
REM . . 3ZHM
SEQ 51 SPDQNRIYLLAKTLGVSEAWLMGRSHHHH 79 3ZHM
STR T HHHHHHHHHHH HHHHH 3ZHM
REM 3ZHM
REM 3ZHM
REM 3ZHM
LOC AlphaHelix ASP 4 A ARG 16 A 3ZHM
LOC AlphaHelix GLN 20 A PHE 34 A 3ZHM
LOC AlphaHelix LYS 40 A ASN 48 A 3ZHM
LOC AlphaHelix GLN 55 A LEU 65 A 3ZHM
LOC AlphaHelix GLU 69 A MET 73 A 3ZHM
LOC TurnVIII SER 49 A SER 52 A 3ZHM
REM 3ZHM
REM --------------- Detailed secondary structure assignment------------- 3ZHM
REM 3ZHM
REM |---Residue---| |--Structure--| |-Phi-| |-Psi-| |-Area-| 3ZHM
ASG LYS A 2 1 C Coil 360.00 -37.12 209.2 3ZHM
ASG THR A 3 2 C Coil -110.85 156.39 31.3 3ZHM
ASG ASP A 4 3 H AlphaHelix -66.02 -45.06 57.4 3ZHM
ASG THR A 5 4 H AlphaHelix -57.63 -41.79 10.0 3ZHM
ASG SER A 6 5 H AlphaHelix -59.32 -39.59 1.4 3ZHM
ASG ASN A 7 6 H AlphaHelix -75.40 -30.65 73.6 3ZHM
ASG ARG A 8 7 H AlphaHelix -76.03 -38.32 17.0 3ZHM
ASG LEU A 9 8 H AlphaHelix -65.67 -49.45 0.6 3ZHM
ASG LYS A 10 9 H AlphaHelix -59.49 -33.08 99.7 3ZHM
ASG GLN A 11 10 H AlphaHelix -67.31 -43.95 17.1 3ZHM
ASG ILE A 12 11 H AlphaHelix -64.22 -42.44 0.0 3ZHM
ASG MET A 13 12 H AlphaHelix -60.02 -38.12 41.5 3ZHM
ASG ALA A 14 13 H AlphaHelix -74.91 -40.93 72.5 3ZHM
ASG GLU A 15 14 H AlphaHelix -72.10 -34.09 90.3 3ZHM
ASG ARG A 16 15 H AlphaHelix -112.67 10.42 102.9 3ZHM
ASG ASN A 17 16 C Coil 52.05 42.81 143.0 3ZHM
ASG LEU A 18 17 C Coil -104.65 132.92 34.9 3ZHM
ASG LYS A 19 18 C Coil -82.52 179.09 141.3 3ZHM
ASG GLN A 20 19 H AlphaHelix -65.34 -41.34 56.5 3ZHM
ASG VAL A 21 20 H AlphaHelix -68.32 -28.06 73.4 3ZHM
ASG ASP A 22 21 H AlphaHelix -70.50 -49.38 53.5 3ZHM
ASG ILE A 23 22 H AlphaHelix -62.65 -37.31 2.2 3ZHM
ASG LEU A 24 23 H AlphaHelix -61.02 -40.28 26.7 3ZHM
ASG ASN A 25 24 H AlphaHelix -72.32 -31.19 87.9 3ZHM
ASG LEU A 26 25 H AlphaHelix -73.83 -20.77 86.4 3ZHM
ASG SER A 27 26 H AlphaHelix -83.27 -22.93 0.2 3ZHM
ASG ILE A 28 27 H AlphaHelix -49.00 -49.28 75.6 3ZHM
ASG PRO A 29 28 H AlphaHelix -65.59 -31.26 76.1 3ZHM
ASG PHE A 30 29 H AlphaHelix -75.96 -24.86 55.9 3ZHM
ASG GLN A 31 30 H AlphaHelix -68.26 -45.34 29.1 3ZHM
ASG LYS A 32 31 H AlphaHelix -70.41 -27.85 169.3 3ZHM
ASG LYS A 33 32 H AlphaHelix -76.46 -45.01 149.4 3ZHM
ASG PHE A 34 33 H AlphaHelix -98.02 -12.74 66.2 3ZHM
ASG GLY A 35 34 C Coil 76.09 25.81 63.6 3ZHM
ASG ILE A 36 35 C Coil -110.56 100.28 17.4 3ZHM
ASG LYS A 37 36 C Coil -76.02 156.62 166.7 3ZHM
ASG LEU A 38 37 C Coil -151.01 116.61 12.4 3ZHM
ASG SER A 39 38 C Coil -89.07 167.50 74.1 3ZHM
ASG LYS A 40 39 H AlphaHelix -79.50 -22.65 158.5 3ZHM
ASG SER A 41 40 H AlphaHelix -74.52 -33.05 73.0 3ZHM
ASG THR A 42 41 H AlphaHelix -69.20 -41.65 34.7 3ZHM
ASG LEU A 43 42 H AlphaHelix -68.10 -34.66 2.8 3ZHM
ASG SER A 44 43 H AlphaHelix -62.57 -39.69 44.3 3ZHM
ASG GLN A 45 44 H AlphaHelix -73.78 -25.04 67.0 3ZHM
ASG TYR A 46 45 H AlphaHelix -65.43 -51.23 4.6 3ZHM
ASG VAL A 47 46 H AlphaHelix -63.00 -32.32 8.0 3ZHM
ASG ASN A 48 47 H AlphaHelix -101.54 16.98 93.1 3ZHM
ASG SER A 49 48 T Turn 58.15 22.79 29.8 3ZHM
ASG VAL A 50 49 T Turn -76.43 -31.19 95.6 3ZHM
ASG GLN A 51 50 T Turn -158.56 149.95 106.3 3ZHM
ASG SER A 52 51 T Turn -103.40 144.62 70.7 3ZHM
ASG PRO A 53 52 C Coil -63.86 146.76 10.3 3ZHM
ASG ASP A 54 53 C Coil -85.91 -172.29 75.9 3ZHM
ASG GLN A 55 54 H AlphaHelix -59.45 -48.55 167.7 3ZHM
ASG ASN A 56 55 H AlphaHelix -66.75 -38.77 90.2 3ZHM
ASG ARG A 57 56 H AlphaHelix -83.47 -18.91 55.7 3ZHM
ASG ILE A 58 57 H AlphaHelix -70.88 -39.61 20.0 3ZHM
ASG TYR A 59 58 H AlphaHelix -67.84 -43.53 75.8 3ZHM
ASG LEU A 60 59 H AlphaHelix -57.73 -45.94 0.0 3ZHM
ASG LEU A 61 60 H AlphaHelix -72.61 -29.21 0.0 3ZHM
ASG ALA A 62 61 H AlphaHelix -66.96 -40.27 3.8 3ZHM
ASG LYS A 63 62 H AlphaHelix -71.23 -40.17 97.2 3ZHM
ASG THR A 64 63 H AlphaHelix -64.16 -46.56 17.3 3ZHM
ASG LEU A 65 64 H AlphaHelix -89.06 -8.13 4.8 3ZHM
ASG GLY A 66 65 C Coil 72.39 31.36 64.7 3ZHM
ASG VAL A 67 66 C Coil -120.05 170.74 22.5 3ZHM
ASG SER A 68 67 C Coil -80.51 154.83 59.1 3ZHM
ASG GLU A 69 68 H AlphaHelix -64.02 -36.28 79.7 3ZHM
ASG ALA A 70 69 H AlphaHelix -69.20 -34.84 68.6 3ZHM
ASG TRP A 71 70 H AlphaHelix -69.65 -38.34 19.7 3ZHM
ASG LEU A 72 71 H AlphaHelix -68.41 -24.26 0.6 3ZHM
ASG MET A 73 72 H AlphaHelix -99.76 0.68 92.3 3ZHM
ASG GLY A 74 73 C Coil -98.64 164.38 17.8 3ZHM
ASG ARG A 75 74 C Coil -84.22 -21.10 208.1 3ZHM
ASG SER A 76 75 C Coil -64.02 145.21 64.8 3ZHM
ASG HIS A 77 76 C Coil -95.26 -9.86 102.4 3ZHM
ASG HIS A 78 77 C Coil -96.10 126.90 143.3 3ZHM
ASG HIS A 79 78 C Coil -71.43 156.37 80.6 3ZHM
ASG HIS A 80 79 C Coil -164.01 360.00 231.5 3ZHM