Classification:
| Class: | Alpha and beta proteins (a+b) |
| Fold: | Homing endonuclease-like |
| Superfamily: | Homing endonuclease-like |
| Family: | Group I mobile intron endonuclease |
Alignment:
Information:
Download full alignment in MSF format: d_95_2_1.msfDownload structural alignment: d_95_2_1.ent
Quality of structural alignment: middling
Method of structural alignment: CE
Description: specific contact with major groove of DNA by beta sheet and loops
| PDB: | Chain: | Residues: | Model number: |
| 1AF5 | A | - | 1 |
| 1B24 | A | 7-99 | 2 |
| 1B24 | A | 100-179 | 3 |
| 1BP7 | A | - | 4 |
| 1BP7 | B | - | 5 |
| 1BP7 | C | - | 6 |
| 1BP7 | D | - | 7 |
| 1G9Y | A | - | 8 |
| 1G9Y | B | - | 9 |
| 1G9Z | A | - | 10 |
| 1G9Z | B | - | 11 |
| 1M5X | A | - | 12 |
| 1M5X | B | - | 13 |
| 1MOW | A | 100-252 | 14 |
| 1MOW | A | 5-99 | 15 |
| 1MOW | D | 505-599 | 16 |
| 1MOW | D | 600-752 | 17 |
| 1MOW | G | 1007-1098 | 18 |
| 1MOW | G | 1100-1250 | 19 |
| 1MOW | J | 1506-1599 | 20 |
| 1MOW | J | 1600-1752 | 21 |
| 1N3E | A | - | 22 |
| 1N3E | B | - | 23 |
| 1N3E | G | - | 24 |
| 1N3E | H | - | 25 |
| 1N3F | A | - | 26 |
| 1N3F | B | - | 27 |
| 1N3F | G | - | 28 |
| 1N3F | H | - | 29 |
| 1P8K | Z | 1-125 | 30 |
| 1P8K | Z | 126-254 | 31 |
| 1R7M | A | 121-225 | 32 |
| 1R7M | A | 3-120 | 33 |
| 1R7M | B | 303-320 | 34 |
| 1R7M | B | 321-525 | 35 |
| 1T9I | A | - | 36 |
| 1T9I | B | - | 37 |
| 1T9J | A | - | 38 |
| 1T9J | B | - | 39 |
| 1U0C | A | - | 40 |
| 1U0C | B | - | 41 |
| 1U0D | A | - | 42 |
| 1U0D | B | - | 43 |
Example 1t9j:
| Protein domain: | DNA endonuclease I-CreI |
| Species: | Chlamydomonas reinhardtii [TaxId: 3055] |
