Документ взят из кэша поисковой машины. Адрес оригинального документа : http://www.mrao.cam.ac.uk/projects/OAS/oi_data/oicopy Дата изменения: Fri Jan 11 15:22:07 2008 Дата индексирования: Fri Feb 28 13:07:27 2014 Кодировка: Поисковые слова: п п п п п п п п п п п п п п п

#!/usr/bin/env python
#
# $Id: oicopy,v 1.4 2004/01/05 13:05:53 jsy1001 Exp $

"""Copy from one OI Exchange Format FITS file to another.

Usage: oicopy [--target_id n] [--arrname array] [--overwrite] [--flag vis/vis2/t3amp/t3] infile outfile

-t/--target_id: only copies records for specified TARGET_ID

-a/--arrname: only copies tables with specified ARRNAME

-o/--overwrite: overwrite output file

-f/--flag: flag all data of specified type (vis/vis2/t3amp/t3)

Other switches will be added later.

"""

__revision__ = '$Revision: 1.4 $'

import sys, getopt, os, string
import oi_fits, pyfits, ieee


def readfile(fileName):
"""Read FITS file.

Returns OI_FITS instance, or None on failure.

"""
hlist = pyfits.open(fileName)
oi = oi_fits.OI_FITS()
try:
oi.FromHDUList(hlist)
except oi_fits.OI_FITSConformError:
hlist.close()
return
hlist.close()
return oi


def writefile(oi, fileName):
"""Write FITS file from OI_FITS instance."""
oi.ToHDUList().writeto(fileName)


def filtertargets(oi, target_ids):
"""Remove records with target_ids not in specified list.

Removes empty data tables afterwards.

"""
for id in oi.target.records.keys():
if id not in target_ids:
del oi.target.records[id]
if len(oi.target.records) == 0:
print '%s: no match' % target_ids
return
for list in (oi.vis, oi.vis2, oi.t3):
for table in list[:]: # [:] makes a copy
for rec in table.records[:]:
if rec.target_id not in target_ids:
table.records.remove(rec)
if len(table.records) == 0: list.remove(table)
return 1


def filterarray(oi, arrname):
"""Remove OI_ARRAY/data tables with arrname != specified value.

Removes redundant OI_WAVELENGTH tables. Leaves instance unchanged and
returns false if no OI_ARRAY table with specified ARRNAME.

"""
try:
oi.arrays = {arrname: oi.arrays[arrname]}
except KeyError:
print '%s: no match' % arrname
return
insnames = []
for list in (oi.vis, oi.vis2, oi.t3):
for table in list[:]: # [:] makes a copy
if table.arrname == arrname:
insnames.append(table.insname)
else:
list.remove(table)
for ins in oi.wavelengths.keys():
if ins not in insnames: del oi.wavelengths[ins]
return 1


def flag(oi, type):
"""Flag all data of specified type.

type argument should be string 'vis', 'vis2', 't3amp', or 't3'
(the Exchange Format does not accommodate flagging of closure
phases but not the corresponding triple amplitudes). NULL
amplitudes are assigned if 't3amp' passed.

"""

if type[:2] == 't3':
tabtype = 't3'
else:
tabtype = type
try:
list = oi.__dict__[tabtype]
except KeyError:
print 'Invalid data type:', type
return
for table in list:
for rec in table.records:
if type == 't3amp':
rec.t3amp = [ieee.NAN]*table.nwave
else:
rec.flag = [1]*table.nwave
return 1

def print_revision():
print '%s v%s' % (sys.argv[0], string.split(__revision__)[1])


def _main():
# Set defaults
target_id = None
arrname = None
overwrite = 0
flagtype = None
# Parse command-line arguments
try:
opts, args = getopt.getopt(sys.argv[1:], "ht:a:f:o",
["target_id=", "arrname=", "flag=",
"overwrite", "help"])
except getopt.GetoptError:
print_revision()
print __doc__
sys.exit(2)
if len(args) != 2:
print_revision()
print __doc__
sys.exit(2)
for o, a in opts:
if o in ("-h", "--help"):
print_revision()
print __doc__
sys.exit()
if o in ("-t", "--target_id"):
target_id = int(a)
if o in ("-a", "--arrname"):
arrname = a
if o in ("-o", "--overwrite"):
overwrite = 1
if o in ("-f", "--flag"):
flagtype = a
inputName, outputName = args
# Perform copy...
# ...read input file
oi = readfile(inputName)
# ...filter
if arrname is not None:
print 'Selecting ARRNAME', arrname
if not filterarray(oi, arrname):
sys.exit(1)
if target_id is not None:
print 'Selecting TARGET_ID', target_id
if not filtertargets(oi, [target_id]):
sys.exit(1)
if flagtype is not None:
print 'Flagging', flagtype
if not flag(oi, flagtype):
sys.exit(1)
# ...write output file
if os.path.exists(outputName):
if overwrite:
os.remove(outputName)
else:
print outputName, 'exists. Aborting'
sys.exit(1)
writefile(oi, outputName)


if __name__ == '__main__':
_main()