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Class Summary |
| AboutBox |
This plugin implements the Help/About ImageJ command by opening
the about.jpg in ij.jar, scaling it 400% and adding some text. |
| Animator |
This plugin animates stacks. |
| ArrowToolOptions |
This plugin implements the Edit/Options/Arrow Tool command. |
| AVI_Reader |
ImageJ Plugin for reading an AVI file into an image stack
(one slice per video frame)
Version 2008-07-03 by Michael Schmid, based on a plugin by
Daniel Marsh and Wayne Rasband
Restrictions and Notes:
- Only few formats supported:
- uncompressed 8 bit with palette (=LUT)
- uncompressed 8 & 16 bit grayscale
- uncompressed 24 & 32 bit RGB (alpha channel ignored)
- uncompressed 32 bit AYUV (alpha channel ignored)
- various YUV 4:2:2 compressed formats
- png or jpeg-encoded individual frames. |
| BatchConverter |
This plugin implements the File/Batch/Convert command,
which converts the images in a folder to a specified format. |
| BatchMeasure |
This plugin implements the File/Batch/Measure command,
which measures all the images in a user-specified folder. |
| BatchProcesser |
This plugin implements the File/Batch/Macro and File/Batch/Virtual Stack commands. |
| BMP_Reader |
This plugin reads BMP files. |
| BMP_Writer |
Implements the File/Save As/BMP command. |
| BrowserLauncher |
This plugin implements the File/Import/URL command and the commands in the Help menu that
open web pages. |
| CanvasResizer |
This plugin implements the Image/Adjust/Canvas Size command. |
| ClassChecker |
Checks for duplicate class and JAR files in the plugins folders and deletes older duplicates. |
| Clipboard |
Copies and pastes images to the clipboard. |
| Colors |
This plugin implements most of the Edit/Options/Colors command. |
| CommandFinder |
|
| CommandLister |
Lists ImageJ commands or keyboard shortcuts in a text window. |
| Commands |
Runs File and Window menu commands. |
| Compiler |
Compiles and runs plugins using the javac compiler. |
| CompositeConverter |
This plugin imlements the Image/Color/Make Composite command. |
| Concatenator |
This plugin, which concatenates two images or stacks, implements the Image/Stacks/Concatenate command. |
| ContrastEnhancer |
Implements ImageJ's Process/Enhance Contrast command. |
| ControlPanel |
ControlPanel. |
| Converter |
Implements the conversion commands in the Image/Type submenu. |
| DICOM |
This plugin decodes DICOM files. |
| DICOM_Sorter |
|
| Distribution |
This plugin implements the Analyze/Distribution command. |
| DragAndDrop |
This class opens images, roi's, luts and text files dragged and dropped on the "ImageJ" window. |
| Duplicator |
This plugin implements the Image/Duplicate command. |
| FFT |
This class implements the FFT, Inverse FFT and Redisplay Power Spectrum commands
in the Process/FFT submenu. |
| FFTMath |
The class implements the Process/FFT/Math command. |
| FileInfoVirtualStack |
This plugin opens a multi-page TIFF file as a virtual stack. |
| FITS_Reader |
Opens and displays FITS images. |
| FITS_Writer |
This plugin saves a 16 or 32 bit image in FITS format. |
| FolderOpener |
Implements the File/Import/Image Sequence command, which
opens a folder of images as a stack. |
| GelAnalyzer |
This plugin generates gel profile plots that can be analyzed using
the wand tool. |
| GifWriter |
Writes a stack as an animated Gif |
| Histogram |
This plugin implements the Analyze/Histogram command. |
| Hotkeys |
Implements the Plugins/Hotkeys/Install and Remove commands. |
| HyperStackConverter |
Implements the "Stack to HyperStack", "RGB to HyperStack"
and "HyperStack to Stack" commands. |
| HyperStackReducer |
Implements the Image/HyperStacks/Reduce Dimensionality command. |
| ImageCalculator |
This plugin implements the Process/Image Calculator command. |
| ImageJ_Updater |
This plugin implements the Help/Update ImageJ command. |
| ImagesToStack |
Implements the Image/Stacks/Images to Stack" command. |
| Installer |
Implements the Plugins/Shortcuts/Install... |
| JavaProperties |
Displays the Java system properties in a text window. |
| JpegWriter |
The File/Save As/Jpeg command (FileSaver.saveAsJpeg() method)
uses this plugin to save images in JPEG format. |
| ListVirtualStack |
This plugin opens images specified by list of file paths as a virtual stack. |
| LUT_Editor |
|
| LutLoader |
Opens NIH Image look-up tables (LUTs), 768 byte binary LUTs
(256 reds, 256 greens and 256 blues), LUTs in text format,
or generates the LUT specified by the string argument
passed to the run() method. |
| Macro_Runner |
Opens and runs a macro file. |
| MacroInstaller |
This plugin implements the Plugins/Macros/Install Macros command. |
| MeasurementsWriter |
Writes measurements to a tab-delimited text file. |
| Memory |
This plugin implements the Edit/Options/Memory command. |
| MemoryMonitor |
This plugin continuously plots ImageJ's memory
utilization. |
| MontageMaker |
Implements the Image/Stacks/Make Montage command. |
| NewPlugin |
This class creates a new macro or the Java source for a new plugin. |
| NextImageOpener |
|
| Options |
This plugin implements most of the commands
in the Edit/Options sub-menu. |
| Orthogonal_Views |
|
| OverlayCommands |
This plugin implements the commands in the Image/Overlay menu. |
| PGM_Reader |
This plugin opens PxM format images. |
| PNG_Writer |
Saves in PNG format using the ImageIO classes. |
| PNM_Writer |
|
| ProxySettings |
This plugin implements the Plugins/Utilities/Proxy Settings command. |
| Raw |
This plugin implements the File/Import/Raw command. |
| Resizer |
This plugin implements the Edit/Crop and Image/Adjust/Size commands. |
| RGBStackConverter |
Converts a 2 or 3 slice stack, or a hyperstack, to RGB. |
| RGBStackMerge |
|
| RoiReader |
Opens ImageJ, NIH Image and Scion Image for windows ROI outlines. |
| ScaleBar |
This plugin implements the Analyze/Tools/Draw Scale Bar command. |
| Scaler |
This plugin implements the Image/Scale command. |
| ScreenGrabber |
This plugin implements the Image/Flatten, Plugins/Utilities/Capture Screen
and Plugins/Utilities/Capture Image commands. |
| Selection |
This plugin implements the commands in the Edit/Section submenu. |
| SimpleCommands |
This plugin implements the Plugins/Utilities/Unlock, Image/Rename
and Plugins/Utilities/Search commands. |
| Slicer |
Implements the Image/Stacks/Reslice command. |
| SpecifyROI |
This plugin implements the Edit/Selection/Specify command. |
| StackCombiner |
This plugin implements the Image/Stacks/Combine command. |
| StackEditor |
Implements the AddSlice, DeleteSlice and "Stack to Images" commands. |
| StackReverser |
Implements the Image/Transform/Flip Z command. |
| StackWriter |
This plugin, which saves the images in a stack as separate files,
implements the File/Save As/Image Sequence command. |
| Straightener |
This plugin implements the Edit/Selection/Straighten command. |
| SurfacePlotter |
|
| TextFileReader |
This plugin displays the contents of a text file in a window. |
| TextReader |
This plugin opens a tab or comma delimeted text file as an image. |
| TextWriter |
This plugin implements the File/Save As/Text command. |
| ThreadLister |
Displays thread information in a text window. |
| Thresholder |
This plugin implements the Process/Binary/Make Binary
and Convert to Mask commands. |
| Timer |
ImageJ plugin for measuring the speed of various Java operations. |
| URLOpener |
Opens TIFFs, ZIP compressed TIFFs, DICOMs, GIFs and JPEGs using a URL. |
| WandToolOptions |
This plugin implements the Edit/Options/Wand Tool command. |
| WindowOrganizer |
|
| XYCoordinates |
Writes the XY coordinates and pixel values of all non-background pixels
to a tab-delimited text file. |
| Zoom |
This plugin implements the commands in the Image/Zoom submenu. |
| ZProjector |
This plugin performs a z-projection of the input stack. |